Neisseria animaloris: NCTC12227_01717
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Entry
NCTC12227_01717 CDS
T06907
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nani
Neisseria animaloris
Pathway
nani03030
DNA replication
nani03430
Mismatch repair
nani03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12227_01717 (dnaE)
03430 Mismatch repair
NCTC12227_01717 (dnaE)
03440 Homologous recombination
NCTC12227_01717 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nani03032
]
NCTC12227_01717 (dnaE)
03400 DNA repair and recombination proteins [BR:
nani03400
]
NCTC12227_01717 (dnaE)
Enzymes [BR:
nani01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC12227_01717 (dnaE)
DNA replication proteins [BR:
nani03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC12227_01717 (dnaE)
DNA repair and recombination proteins [BR:
nani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC12227_01717 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
VEJ21950
UniProt:
A0A448UDG2
LinkDB
All DBs
Position
1:1830357..1833791
Genome browser
AA seq
1144 aa
AA seq
DB search
MTSPIYIPLRLHTEFSITDGTVRIKDAVKKAVSDGLPALGVSDLMNTFGLVKFYKACRGA
GIKPVAAANVWIENPAAPDKPFRAMLLVKNDSGYLRLSELLTAAYVGKDRNVDHAELRQA
WLAEGDNSGLICLSGAHYGEVGANLMNGHADAAKAAAQKYAAWFPNAFYLELQRLPERPQ
WEASVSGSVEIAAELDLPVVATHPTQFLNREDFQAHEARVCIAGGWVLADKKRPQEFTPS
QFFVSPDVMAERFADLPEALQNTVEIAKRCNLTLTLGKNFLPLFPTPDGMSLDDYLTQLS
NEGLQERMVQLYPDEAERAEKMPEYQARLDFELGIIIQMGFPGYFLIVQDFINWAKNNGC
PVGPGRGSGAGSLVAYALKITDLDPLKYALLFERFLNPERVSMPDFDIDFCQSNRGRVIE
YVREKYGADAVSQIVTFGTMSSKAVIRDVGRVLELPFGLCDRLSKLIPLEANRPVSLEKA
MEMEPEIRQLIEEEGAEELMTLAQKLEDLTRGLGMHAGGVLIAPGKISDFSPVYQADESA
SPVSMYDKGDVEDVGLVKFDFLGLRNLTIIEMAQENIKNTVGEEIDVNTIPLDDQAAYKI
FRDANTTAVFQFESTGMKKMLKTAHTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQAFE
YIHPLLEPVLEPTYGIMVYQEQVMQAAQVIGGYSLGGADLLRRAMGKKKPEEMVKHREIF
AKGAEEKAISRKKADEIFDYMEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATM
SSELDNTDQLKHFYDDARANGISFLPPDINESDYLFTPNNQKQIRYALGAVKGVGEGAVE
AIMQARKESGKFKDLLDFCERVDKAHLNKRTVESLIRAGAFDNLNPNRSMLIANIDLAIS
NAEQKAANANQGGLFDFVEDAIEPVQMEETPAWSESEKLAEEKQVLGFYLSGHPFGPYAE
EVRQIAPTRLSRLKPQDNVRVAGFTTAVRTMMGKRGKIAFATLEDQSGQVEVMITGHVLE
ESAGRLKADQVLIMECKISRDDYSGGDALRIMANQVMTLQTARERYARSLSLSLKPEHDI
PALVALLNAHRLPDTGHIPLRLSYSNAAAAGDLQIPPKWTVTPSAELFGKLETLLGGRSV
RVNW
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgacaagccctatctacatccccttacgcctgcacaccgaattttcgattaccgacggc
acggtacgcatcaaagatgccgtgaaaaaagccgtttcagacggcctgcccgcgctgggc
gtgagcgacctgatgaatactttcggcttggtaaaattctacaaagcctgccgcggcgca
ggcatcaaaccggtggcggcggcgaacgtgtggatcgaaaaccccgccgcgcccgacaaa
cctttccgcgccatgcttctcgtgaaaaacgacagcggctacctgcgcctgagcgagctg
ctcaccgccgcctatgtgggcaaagaccgcaacgtcgatcatgccgagctgcggcaggcg
tggctggcagaaggcgacaacagcggccttatctgtttatcgggcgcacactacggcgaa
gtgggcgcaaacctgatgaacggccatgccgatgcggccaaagcggcggcgcaaaaatac
gcggcgtggtttcccaatgcgttttatctcgaactgcaacgcctgcccgaacgcccgcaa
tgggaggcttccgtatccggcagcgtcgaaatcgcggcggaattggatttgccggtagtc
gccacccatccgacccagtttctcaaccgcgaagatttccaagcccacgaagcgcgggtg
tgcattgccggcggctgggtgctggcagataaaaaacgcccgcaagaatttacgccgagc
cagtttttcgtatcgcccgacgtgatggccgagcgtttcgccgacctgcccgaagcgctg
caaaacacggtggaaatcgccaaacgctgtaatctcacgctcacgctgggcaaaaacttt
ttgccgctgttccccacacccgacggcatgtcgctcgacgactacctgacccagctttcc
aacgaaggtttgcaagagcgtatggtgcagctttaccccgacgaagcggaacgcgccgaa
aaaatgcccgaatatcaggcacgcttggattttgaattgggcatcatcatccaaatgggc
tttccgggctacttcctcatcgtacaagacttcatcaactgggcgaaaaacaacggctgc
ccggtggggccggggcgcggttcgggtgcaggctcgctggtggcctatgcgctgaaaatc
accgacctcgacccgttgaaatacgcgctgctgttcgagcggttcttaaaccccgagcgc
gtttccatgcccgacttcgatatcgacttctgccaaagcaaccgcggccgcgtgattgaa
tatgtgcgcgaaaaatacggtgccgatgccgtgagccaaatcgttaccttcggcactatg
tcgtccaaagccgttatccgcgacgtgggccgcgtgctggaactgccgttcggcctgtgc
gaccgcttgtcgaaactgattccgctcgaagccaaccgccccgtgagccttgaaaaagcg
atggaaatggagccggaaatccgccagctgatcgaagaagaaggcgcggaagagttgatg
acgctggcgcaaaagctggaagacctcacgcgcggcttgggcatgcacgcaggcggcgtg
ttgattgcgccgggcaaaatttccgacttcagccccgtgtatcaggccgacgaatcggcc
tcgcccgtgtcgatgtacgacaaaggcgacgtggaagacgtgggcttggtgaagttcgac
ttcttgggcttgcgcaacctcaccattatagaaatggcgcaggaaaacattaaaaacacc
gtcggcgaagaaatcgacgtcaacaccattccgctcgacgaccaagccgcttacaaaatt
ttccgcgatgccaacaccaccgccgttttccagtttgaatcgaccggcatgaaaaaaatg
ctgaaaacggcgcacaccaccaaatttgaagagttgatcgccttcgtatcgctttaccgc
cccggcccgatggacaacattcccgatttcgtcgcccgcatgaaggggcaggcgtttgaa
tacatccacccgctgctggagccggtgttggagccgacttacggcatcatggtttaccaa
gagcaggtgatgcaggccgcacaggtaatcggcggctactcgctcggcggtgcggacttg
ctgcgccgcgccatgggtaagaaaaagcccgaagaaatggtgaaacaccgcgaaatcttc
gccaaaggcgcggaagaaaaagccatttcccgcaaaaaagccgacgaaattttcgactac
atggaaaaattcgccggctacggcttcaacaaatcgcacgccgccgcctacgcgctgatt
tcctaccaaaccgcctggctgaaagcgcattatcccgccgaattcatggccgctaccatg
tcgagcgagttggacaacaccgaccagctcaaacatttctacgacgacgcacgcgccaac
ggcatctcgttcctgccgcccgacatcaacgaatcggattacctgttcacgcccaacaac
caaaaacaaatccgctacgccctcggcgccgtcaaaggcgtgggcgaaggcgcggtcgaa
gccatcatgcaggcgcgcaaagagagcggcaaattcaaagacctgcttgatttctgcgaa
cgcgtcgacaaagcccacctcaacaaacgcacggtggaatcgctgatacgcgccggcgcg
ttcgacaacctcaaccccaaccgctccatgctgatcgccaatatcgacttagccatcagc
aacgccgaacaaaaagccgccaacgccaatcagggtgggctgttcgacttcgtagaagat
gccatcgagcccgtgcagatggaagaaacccccgcgtggagcgaatcggaaaaactcgcc
gaagaaaaacaagtgctcggcttctacctttccggccaccccttcggcccctacgccgaa
gaagtgcgccaaatcgcccccacccgcctaagccgtctgaaaccgcaagacaacgtacgc
gtggccggcttcaccaccgccgtgcgcaccatgatgggcaaacgcggcaaaatcgccttc
gccaccctcgaagaccaaagcggccaagtggaagtgatgattaccggccacgtgctggaa
gaaagcgcaggccgtctgaaagccgaccaagtgctgattatggaatgcaaaatcagccgc
gacgattacagcggcggcgatgccctgcgcatcatggccaatcaagtgatgaccctgcaa
accgcccgcgaacgctacgcccgcagcctgagcctgagcctcaaacccgaacacgacatc
cccgccttagtggcactgctgaacgcccaccgcctgcccgacaccggccacatcccgctg
cgcctctcatacagcaacgccgcagccgccggcgacttgcagattccgcccaaatggacg
gtaacgccgagcgcggaactcttcggcaaactggaaacccttttaggcggacgctccgtg
cgggtaaattggtaa
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