Neisseria animaloris: NCTC12227_01739
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Entry
NCTC12227_01739 CDS
T06907
Symbol
cafA
Name
(GenBank) cytoplasmic axial filament protein
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
nani
Neisseria animaloris
Brite
KEGG Orthology (KO) [BR:
nani00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nani03019
]
NCTC12227_01739 (cafA)
03009 Ribosome biogenesis [BR:
nani03009
]
NCTC12227_01739 (cafA)
Messenger RNA biogenesis [BR:
nani03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC12227_01739 (cafA)
Ribosome biogenesis [BR:
nani03009
]
Prokaryotic type
rRNA processing factors
NCTC12227_01739 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
VEJ21972
UniProt:
A0A3S4XU59
LinkDB
All DBs
Position
1:1867302..1868939
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AA seq
545 aa
AA seq
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MASRQGGFAQTMRFAYDYRQQQTIKTLLQPAFKAEIRLQKYFYIQKMIMLTGIPLPKDTV
RPPETVLVNITPQETRVAMLEENNICELHIERNSGHGLVGNIYLGVVRRVLPGMQSAFID
IGLERAAFLHIVDVLEQRRNPEEIQRIEHMLFEGQSVLVQVIKDPINTKGARLSTQISLA
GRFLVHLPQEEHIGISQRIEDESERNSLRDRLNNLLPENACRGYIIRTSAETATDAELQA
DIDYLTKVWENILHQSKTQPPETLLYQDLPLSLRVLRDLFSENTREILVDSKENYLRMRE
FAEQYVQGATDKITLFKGERPLFETHNVEQEINRSLQPRVNLNFGSYLIIESTEAMTTID
VNTGGFVGARNFEETIFRTNLEACHTIARELRLRNLGGIIIIDFIDMLSEEHREAVLQEL
AKALSFDRTRVTLNGFTSLGLVELTRKRTRENLNQVLCEPCPSCQGRGRLKTPQTVCYEI
QREIVREARRYDAKSFRILAAPNVIDLFLDEESQSLAMLIDFIGKPISLAVETAYTQEQY
DIVLL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccgccaaggcggctttgcgcaaaccatgcgtttcgcgtatgattacaggcag
caacaaacgataaaaacacttttgcaaccggctttcaaagctgagattcggttgcaaaag
tatttttatattcagaaaatgattatgttaacaggtatccctttacctaaagacaccgtt
cgtccgcccgaaacggtgttggtcaatatcacgccacaggaaacgcgtgtggcgatgctg
gaagaaaacaatatctgcgagctgcatattgagcgtaacagcggccacggtttggtcggc
aatatttatttaggcgtagtccgccgcgttttgccgggcatgcagagtgcttttatcgac
attggtttggaacgtgccgctttcctgcatattgtcgatgtattggaacagcggcgtaat
cccgaagaaatccagcgcatcgagcatatgctgtttgaaggccagtcggtattggtgcag
gtgattaaagacccgatcaataccaaaggggcccgcctttccacccagatttctcttgcc
ggccgctttctggtgcatctgccgcaagaagaacatatcggcatttcccaacgcattgaa
gacgaaagcgaacgcaacagcctgcgtgaccgtctcaacaacctgcttcccgaaaatgcc
tgccgcggctatatcatccgcaccagtgcggaaactgcaaccgatgccgaattgcaggca
gatatcgattatctgaccaaagtatgggaaaacattctgcaccaatccaaaacccagccg
cctgaaacgctgctgtatcaggatctgccgctcagtttacgcgtattgcgcgatttgttc
agtgaaaacacccgtgaaattctggtcgactccaaagaaaattatctgcgtatgcgtgaa
ttcgccgagcagtatgtgcaaggagccacggataaaatcaccttgttcaaaggcgagcgg
ccgctgtttgaaacccataatgtcgaacaggaaatcaaccgctccctgcaaccgcgagtc
aacctcaacttcggcagctatctgattatcgaatccaccgaagcgatgacaaccatagat
gtgaataccggcgggtttgttggtgcgcgcaattttgaagaaaccattttcagaaccaac
ctcgaagcctgccacaccatcgcccgcgaattgcggctgcgtaatctgggcggtatcatc
atcatcgactttatcgatatgctgtcggaagagcaccgcgaagccgtgttgcaggagctg
gccaaagccctgagcttcgaccgcacccgcgttaccctcaacggctttaccagcttgggc
ttggtcgagctgacccgcaaacgcacgcgtgaaaacctgaatcaagtgttgtgcgaaccc
tgcccttcctgccaaggcagaggccgtctgaaaacgccgcaaaccgtgtgctatgaaatc
caacgcgaaatcgtgcgcgaagcccgccggtatgatgcgaaaagtttccgcatccttgcc
gcaccgaatgtgatcgatctgtttctcgacgaagaatcgcaatcgcttgccatgttaatc
gactttatcggcaagcccatttcgctggcggtggaaacggcttatacgcaagagcaatac
gatatcgtgctgctgtaa
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