Nannocystis punicea: O0S08_32035
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Entry
O0S08_32035 CDS
T08663
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nann
Nannocystis punicea
Brite
KEGG Orthology (KO) [BR:
nann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nann03032
]
O0S08_32035
03400 DNA repair and recombination proteins [BR:
nann03400
]
O0S08_32035
Enzymes [BR:
nann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
O0S08_32035
DNA replication proteins [BR:
nann03032
]
Prokaryotic type
DNA Topoisomerases
O0S08_32035
DNA repair and recombination proteins [BR:
nann03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
O0S08_32035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WAS90843
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All DBs
Position
8330194..8331348
Genome browser
AA seq
384 aa
AA seq
DB search
MLPAPDAVTCADDAGLVYVTDANPGIRRRRAGNGFAYRDAKGRPVRDAELLARIRRLAIP
PAWTEVWICPDPRGHIQAVGRDARGRKQYRYHPRWREVRDSTKYERMLAFAAALPAIRAR
VDRDLRRPRLDRDKVLATVVRLLDATHIRIGNPEYAHSNDSYGLTTMHDRHVQIHGKHIE
FRFRGKAGKLHRVALDDARLAKIVRSCRDVPGQDLFQFYDHAGTHHAIGSADVNAYLRAC
SGSEFSAKDFRTFAGTVLAAEELWRDPRPEQKYRRKQAVTRAIERVAGCLGNTATVCRKC
YVHPSVLEAYEDGAPLPAAPRGPRAYQALRPEERRAVALLLEQQRTAGQRTLSARLAASL
KDRRAARHAAPRRAARHVEERRAA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgctccccgcccccgatgccgtcacttgcgccgacgacgccggactcgtctacgtgacc
gatgcgaacccggggatccgccgccgccgcgccggcaacgggttcgcctaccgcgacgcg
aaaggccgcccggtccgcgacgcggagctattggcgcgcatccgccggctggcgatccca
ccggcctggacggaggtgtggatctgccccgatccacgcggccacatccaggcggtcggc
cgcgacgcccgcggacgcaagcaataccgctaccacccgcgctggcgagaggtccgcgac
agcaccaagtacgagcgcatgctggcgttcgcggcggcgctgccggcgatccgcgcccgc
gtcgaccgcgacctccgccgcccccggctcgaccgcgacaaggtgctcgccactgtggtg
cgactgctcgacgccacgcacatccgcatcggcaaccccgaatacgcgcactccaacgat
tcgtacggcctgacgacgatgcacgaccgccacgtgcagatccacggcaagcacatcgag
ttccgcttccgcggcaaggccggcaagctgcaccgcgtcgccctcgacgacgcccgcctg
gcgaagatcgtccgcagctgccgcgacgtgccgggccaggacctgttccaattctacgac
cacgccggcacccaccacgcgatcggctcggccgacgtcaacgcctacctgcgcgcctgc
tcgggcagcgagttcagcgccaaggacttccgcacgttcgccggcacggtgctggcggcg
gaggagctgtggcgcgaccccaggccggagcagaagtaccgccgcaagcaggcggtcacg
cgggcgatcgagcgggtcgccggctgcctcggcaacaccgcgacggtgtgccgcaagtgc
tacgtgcacccctcggtgctcgaggcctacgaggacggggcgccgctgccggccgcgccc
cgcgggccccgggcctatcaggcgctgcgccccgaggagcgccgcgcggtcgccctcctg
ctcgagcagcagcggaccgccggccagcgcaccctgtcggcccgcctggccgcgtcgctg
aaggaccgccgcgcggcccgccacgccgcgccgcgccgcgccgcgcgtcacgtcgaggag
cgccgggccgcctga
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