Nannocystis punicea: O0S08_42145
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Entry
O0S08_42145 CDS
T08663
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
nann
Nannocystis punicea
Brite
KEGG Orthology (KO) [BR:
nann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nann03000
]
O0S08_42145 (rtcR)
Transcription factors [BR:
nann03000
]
Prokaryotic type
Other transcription factors
Others
O0S08_42145 (rtcR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
AAA_16
NACHT
Mg_chelatase
AAA_22
AAA_19
AAA_30
ATPase_2
NTPase_1
TsaE
ResIII
AAA_14
IstB_IS21
T2SSE
MCM
AAA_18
AAA_7
cobW
DUF2789
AAA_33
AAA_2
Motif
Other DBs
NCBI-ProteinID:
WAS92819
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Position
11010775..11012376
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AA seq
533 aa
AA seq
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MRRPTVVLGILGSQMDIGGRNRWDRWRPTVDLCRHDDLIVDRLELIHGSAHAELAEAVTA
DIAQISPETRVRLHRLDFADPWAFEEVYAGLLDFVRAYPFRPDDEDYLVHITTGTHVQQI
CLFLLTESRYLPGRLLQTIPPARRDQGDPGAHAIIDLDLARYAPIAERFAEDARAGESFL
KAGIATRNAAFNELIAQIEQVAGVTRAPILLTGPTGAGKTRLARKIFELKQNRHQIRGTF
VELNCATLRGDAAMSALFGHVRGAFTGAVRDRAGVLKMADGGLLFLDEIGELGLDEQAML
LRAIEDRVFLPVGSDREIRSEFQLVAGTNRDLRADVTTGRFREDLLARIDLWSFRLPGLR
ERREDLEPNLDYELERWSQRHGRKASFYGQARAAFLKFATASDAAWSGNFRDLAAAVERM
ATLAPGGRISVREVEAELARLRAAWSSTPVNVGDDQLTRLLGKERLAEVDPFDRVQLAEV
VRVCSAARNLSDAGRTLFAASRLRKRSSNDADRLRKYLQRFDLEWADIHPEDA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcggaggcccacggtcgtcctggggatcctcggctcccagatggacatcggcggacgc
aaccgctgggaccgctggcggcccacagtcgacctctgccgtcacgacgacctcatcgtc
gaccggctcgagctcatccacggcagcgcccacgccgagctggccgaggccgtcaccgcg
gacatcgcccagatctcgccggagacccgggtgcgcctgcaccgcctcgatttcgccgat
ccgtgggccttcgaggaggtgtacgccggcctcctcgacttcgtccgggcctacccgttc
cgcccggacgacgaggactacctggtgcacatcaccacgggtacgcacgtgcagcagatc
tgcctgttcctgctgaccgagtcgcgctacctgcccggtcgcctgctgcagacgatcccg
ccggcgcgccgcgaccagggcgaccccggcgcccacgcgatcatcgacctcgacctcgcc
cgctacgccccgatcgccgagcgcttcgccgaggacgcccgcgccggcgagtccttcctc
aaggcggggatcgccacccgcaacgcggccttcaacgagctcatcgcccagatcgagcaa
gtcgccggggtgacgcgcgcgccgatcttgctgactggcccgaccggcgccggcaagacc
cgcctggcccgcaagatcttcgagctcaagcagaaccgccaccagatccgcggcaccttc
gtcgagctcaactgcgccaccctgcgcggtgacgcggcgatgtcggcgctgttcggccac
gtccgcggcgccttcaccggcgccgtccgcgaccgcgccggcgtgctcaagatggccgac
ggcggcctcctcttcctcgacgagatcggcgagctcggcctcgacgagcaggcgatgctg
ctgcgcgcgatcgaggaccgcgtgttcctcccggtcggcagcgatcgcgagatccgcagc
gagttccagctggtcgccggcaccaaccgcgacctgcgggccgacgtcaccaccggccgc
tttcgcgaggacctgctggcccgcatcgacctgtggtcgttccgcttgcccggcctgcgc
gagcgtcgcgaggacctcgagcccaacctcgactacgagctcgagcgctggtcacagaga
catggccgaaaggccagcttctacggccaggcgcgcgccgccttcctgaagttcgccacc
gccagcgacgcggcgtggtcgggcaacttccgcgacctcgcggcggccgtcgagcgcatg
gccacgctcgcgccgggcgggcggatctccgtgcgcgaggtcgaggcggagctcgcccgc
ctgcgcgccgcctggtcgagcaccccggtcaacgtcggcgacgaccagctgacgcgcctg
ctcggcaaggaacgcctggccgaggtcgacccgttcgaccgcgtgcagctggccgaggtg
gtgcgcgtgtgctcggccgcccgcaacctgtccgacgccggccgcaccctgttcgccgcc
tcgcgcctgcgcaagcgctcgagcaacgacgccgaccgcctgcgcaagtacctgcagcgc
ttcgacctcgagtgggccgacatccatcctgaggacgcctag
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