Nannocystis punicea: O0S08_45165
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Entry
O0S08_45165 CDS
T08663
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
nann
Nannocystis punicea
Pathway
nann02020
Two-component system
nann02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nann00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
O0S08_45165
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
O0S08_45165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
nann02022
]
O0S08_45165
Two-component system [BR:
nann02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
O0S08_45165
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
AAA_5
AAA
AAA_16
Mg_chelatase
AAA_22
HTH_8
IstB_IS21
AAA_25
AAA_7
AAA_19
AAA_3
AAA_33
AAA_30
HTH_IclR
AAA_18
AAA_2
AAA_24
MTBMA_p00010_2nd
Motif
Other DBs
NCBI-ProteinID:
WAS93389
UniProt:
A0ABY7H295
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All DBs
Position
11772073..11773116
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AA seq
347 aa
AA seq
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MDSAHPEAHGEMGPLFSPDEKRDPTLRFRSTLRADDLIGRSPPMVELLRQLSLLAPLDVS
VLLTGPSGTGKTHVARVMHASSPRAAAGNFVELSCANLPDNLVESELFGAAPGAHSTAVK
AVEGKVFAARGGTLLFDEIAELSLPAQAKLLQLLQSREYYPLGASRPRAADVRVIAATNC
DLKARVARREFREDLYYRLHVVPIRVPSLAERRDDIPELAQHFCVRACVRHRLPPLHLSQ
WTLVTAQAASWPGNIRELANAVEAAVIRAAGEDAREVETRHLLPDREVRHDSATPLNYRE
ALRRFQTHLVRGTLEDSNWNVAEAARRLALTRAHIYNLMQTLDISRP
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgcgcatcccgaggcccacggggagatggggcccttgttctcgccggacgag
aagcgcgacccgacgctccgcttccgcagcaccttgcgggccgacgacctgatcggccgc
tcgccgccgatggtcgagctgctgcgccagctctcgctcctggccccgctcgacgtctcg
gtcctgctcaccggcccgtccgggaccggcaagacgcacgtcgcccgcgtgatgcacgcc
tccagcccgcgcgccgccgccggcaacttcgtcgagctgagctgcgccaacctgcccgac
aacctcgtcgagagcgagctcttcggcgccgccccgggcgcccactcgaccgcggtcaag
gcggtcgagggcaaggtgttcgccgcccgcggcggcaccctgctgttcgacgagatcgcc
gagctctcactgcccgcgcaggccaagctgctgcagctgctgcagtcgcgcgagtactac
ccgctcggcgccagccgcccgcgcgccgccgacgtgcgggtgatcgccgccaccaactgc
gacctcaaggcccgcgtcgcccgccgcgagttccgcgaggacctgtactaccgcctccac
gtcgtcccgatccgcgtgccctcgctggccgagcggcgcgacgacatccccgagctcgcc
cagcacttctgcgtccgcgcctgcgtgcgccaccgcctgccgccgctgcacctgtcccaa
tggacactcgtcaccgcccaggccgccagctggcccggcaacatccgcgagctcgccaac
gccgtcgaggccgcggtcatccgcgccgccggcgaggacgcgcgcgaggtcgagacccgc
cacctgttgcccgaccgcgaggtccgccacgacagcgccaccccgctcaactaccgcgag
gccctgcgccgcttccagacccatctggtccgcggcaccctcgaggacagcaactggaac
gtcgccgaggcggcgcgccggctcgccctcacgcgcgcgcacatctacaacctgatgcag
accctggacatctcgcgcccctga
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