KEGG   Nannocystis punicea: O0S08_45955
Entry
O0S08_45955       CDS       T08663                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
nann  Nannocystis punicea
Pathway
nann03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nann00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    O0S08_45955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nann03019]
    O0S08_45955
Enzymes [BR:nann01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     O0S08_45955
Messenger RNA biogenesis [BR:nann03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     O0S08_45955
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 TFIIA AAA_19 Utp25_C
Other DBs
NCBI-ProteinID: WAS93532
UniProt: A0ABY7H2V8
LinkDB
Position
11959434..11960789
AA seq 451 aa
MQDNLPVVSPAQASDFAALGLSETLLRALRQEGHTTPTPIQAAAIPPALLGRDLFGCAQT
GTGKTAAFVLPIVHQMLQRPAAREAGVRALILTPTRELAAQIGERIGVYARFTGLRHAVI
YGGVGMQNQVQALRAGLDLLVATPGRLVDLMAQGLVRLQRVEFFVLDEADRMLDEGFLPS
IRRVVGVLPKQRQTLLFSATMPPEIAPLAAQVLRDPLHIEATPVASAPEAIEQSVYFVAQ
EHKRDLLRHVLGDGAVTRAIVFTRTKHGADRVARQLAQGQIHAEAIHGDKAQSTRLRALS
RFRDGQVRVLVATDLAARGIDVSGISHVINYDLPMDPEAYVHRIGRTARAGSQGVALSFC
SGEEQVRLKGIERLIRRRVPIVHNHPFAGTVDDSQPARAQPQQARPQQPRQQQQRAQQPR
QQRPQQQPRQQQRPAGAPARGAQGNRRATVR
NT seq 1356 nt   +upstreamnt  +downstreamnt
gtgcaagacaaccttcctgtcgtttctcctgcccaggcgtcggacttcgccgcgctgggc
ctgtccgagaccctgctccgcgcgctgcgccaggagggtcacaccacgccgacgccgatc
caggcggcggccatcccccctgccctcctcggccgcgacctgttcggctgcgcccagacg
ggcaccggcaagacggccgcgttcgtgctgccgatcgtccaccagatgctgcagcgcccg
gccgcgcgcgaggcgggggtccgcgcgctgatcctgacgccgacgcgcgagctggcggcc
cagatcggcgagcggatcggcgtgtacgcgcgcttcaccgggctgcgccacgcggtcatc
tacggcggcgtcggcatgcagaaccaggtccaggcgctgcgcgccggcctcgacctgctg
gtcgccacacccggtcgcctggtcgacctcatggcccagggcctggtccgcctgcagcgg
gtcgagttcttcgtcctcgacgaggccgaccgcatgctcgacgagggcttcctgccgtcg
atccgccgcgtcgtcggcgtgctgccgaagcagcgccagaccctgctgttctccgcgacc
atgccgccggagatcgccccactggccgcccaggtgctgcgcgacccgctgcacatcgag
gccacgccggtcgcgtccgcgcccgaggcgatcgagcagtcggtctacttcgtcgcccag
gagcacaagcgcgacctgctgcgccacgtcctcggcgacggcgccgtcacgcgggcgatc
gtcttcacccgcaccaagcacggcgccgaccgggtggctcgccagctcgcgcagggccag
atccacgccgaggcgatccacggcgacaaggcccagagcacccgcctgcgcgccctgtcc
cgcttccgcgacggccaggtccgcgtcctcgtcgccaccgacctcgccgcccgcggcatc
gacgtcagcgggatctcccacgtcatcaactacgacctgccgatggaccccgaggcctac
gtccaccggatcggccgcaccgcccgcgccggctcgcagggcgtcgccctgtcgttctgc
agcggcgaggagcaggtccgcctcaagggcatcgagcgtctgatccgtcgccgcgtcccg
atcgtgcacaaccacccgttcgcgggcaccgtcgacgacagccagcccgcccgcgcccag
ccgcaacaggcgcgcccgcagcagccgcgccagcaacagcagcgcgcgcagcagccccgg
cagcaacggccgcagcagcagccgcgccagcagcagcgccccgccggcgcccccgcccgc
ggggcccagggcaaccggcgagcgacggtccgctag

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