Nannocystis punicea: O0S08_45955
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Entry
O0S08_45955 CDS
T08663
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
nann
Nannocystis punicea
Pathway
nann03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nann00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O0S08_45955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nann03019
]
O0S08_45955
Enzymes [BR:
nann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O0S08_45955
Messenger RNA biogenesis [BR:
nann03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O0S08_45955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
TFIIA
AAA_19
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
WAS93532
UniProt:
A0ABY7H2V8
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All DBs
Position
11959434..11960789
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AA seq
451 aa
AA seq
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MQDNLPVVSPAQASDFAALGLSETLLRALRQEGHTTPTPIQAAAIPPALLGRDLFGCAQT
GTGKTAAFVLPIVHQMLQRPAAREAGVRALILTPTRELAAQIGERIGVYARFTGLRHAVI
YGGVGMQNQVQALRAGLDLLVATPGRLVDLMAQGLVRLQRVEFFVLDEADRMLDEGFLPS
IRRVVGVLPKQRQTLLFSATMPPEIAPLAAQVLRDPLHIEATPVASAPEAIEQSVYFVAQ
EHKRDLLRHVLGDGAVTRAIVFTRTKHGADRVARQLAQGQIHAEAIHGDKAQSTRLRALS
RFRDGQVRVLVATDLAARGIDVSGISHVINYDLPMDPEAYVHRIGRTARAGSQGVALSFC
SGEEQVRLKGIERLIRRRVPIVHNHPFAGTVDDSQPARAQPQQARPQQPRQQQQRAQQPR
QQRPQQQPRQQQRPAGAPARGAQGNRRATVR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagacaaccttcctgtcgtttctcctgcccaggcgtcggacttcgccgcgctgggc
ctgtccgagaccctgctccgcgcgctgcgccaggagggtcacaccacgccgacgccgatc
caggcggcggccatcccccctgccctcctcggccgcgacctgttcggctgcgcccagacg
ggcaccggcaagacggccgcgttcgtgctgccgatcgtccaccagatgctgcagcgcccg
gccgcgcgcgaggcgggggtccgcgcgctgatcctgacgccgacgcgcgagctggcggcc
cagatcggcgagcggatcggcgtgtacgcgcgcttcaccgggctgcgccacgcggtcatc
tacggcggcgtcggcatgcagaaccaggtccaggcgctgcgcgccggcctcgacctgctg
gtcgccacacccggtcgcctggtcgacctcatggcccagggcctggtccgcctgcagcgg
gtcgagttcttcgtcctcgacgaggccgaccgcatgctcgacgagggcttcctgccgtcg
atccgccgcgtcgtcggcgtgctgccgaagcagcgccagaccctgctgttctccgcgacc
atgccgccggagatcgccccactggccgcccaggtgctgcgcgacccgctgcacatcgag
gccacgccggtcgcgtccgcgcccgaggcgatcgagcagtcggtctacttcgtcgcccag
gagcacaagcgcgacctgctgcgccacgtcctcggcgacggcgccgtcacgcgggcgatc
gtcttcacccgcaccaagcacggcgccgaccgggtggctcgccagctcgcgcagggccag
atccacgccgaggcgatccacggcgacaaggcccagagcacccgcctgcgcgccctgtcc
cgcttccgcgacggccaggtccgcgtcctcgtcgccaccgacctcgccgcccgcggcatc
gacgtcagcgggatctcccacgtcatcaactacgacctgccgatggaccccgaggcctac
gtccaccggatcggccgcaccgcccgcgccggctcgcagggcgtcgccctgtcgttctgc
agcggcgaggagcaggtccgcctcaagggcatcgagcgtctgatccgtcgccgcgtcccg
atcgtgcacaaccacccgttcgcgggcaccgtcgacgacagccagcccgcccgcgcccag
ccgcaacaggcgcgcccgcagcagccgcgccagcaacagcagcgcgcgcagcagccccgg
cagcaacggccgcagcagcagccgcgccagcagcagcgccccgccggcgcccccgcccgc
ggggcccagggcaaccggcgagcgacggtccgctag
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