Nannocystis punicea: O0S08_48070
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Entry
O0S08_48070 CDS
T08663
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nann
Nannocystis punicea
Brite
KEGG Orthology (KO) [BR:
nann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nann03032
]
O0S08_48070 (gyrB)
03400 DNA repair and recombination proteins [BR:
nann03400
]
O0S08_48070 (gyrB)
Enzymes [BR:
nann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
O0S08_48070 (gyrB)
DNA replication proteins [BR:
nann03032
]
Prokaryotic type
DNA Topoisomerases
O0S08_48070 (gyrB)
DNA repair and recombination proteins [BR:
nann03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
O0S08_48070 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WAS93949
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Position
12495185..12497659
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AA seq
824 aa
AA seq
DB search
MSEVDKTQAPADDYNADSISVLEGLEAVRKRPGMYIGDTSDGSGLHKMVFEVVDNSIDEA
LAGWCRNIEVTIHPDNSVSVDDDGRGIPVGAMEVGGKVMDAAIVILTVLHAGGKFNNNNY
KVSGGLHGVGVSVVNALSDWLKLEIWRDNKVHNVRFERGDAVTPVEAGGRTERRGTRVHF
HPDPLIFSTTEIDFEVLANRFRELSFLNQGVRMHLRDLRSGREKVFDGEGGIPSFVKLLA
QHKEVVGDLIAFSRDIEFEYEGEQKTLGVQVAMQWTDAYQETILCFTNNIANRDGGTHLT
GFRTALTKVVNSYADSTGQLKAHKTNLAGEEVREGLVAIVSIRHPDPKFSSQIKDKLVSG
EVTSLVSTVVNEELGKYLEENPRSAKLVVERAILAARARAAARKARETITRKGILDGLSL
PGKLADCQEKAPEHAEIFIVEGDSAGGSAKQGRDRRTQAILPLRGKILNVEKARVDKMLS
SQEIITLITALGTGIGPDSYDINKLRYHTIVIMTDADVDGSHIRTLLLTFFYRHFPEIIE
REHLYIAQPPLYKVKAGKVETYLKNEAALDEFIINNAVGDLELVIGSHAVSGEVFAAIAR
QGARYKQLVESLAREHRSQVVEFLVDKLEADANLAVSFTDEAAVAALGAALKAEVTPRIE
NNPTIEVSVEADPTDPARKQLRVQILVDGVRHDELVNVELLGGYQLTELLKIRRQLVDYG
TGDLALRRKGEVVASPKRLLDVVHHIGELGRSGLQIQRYKGLGEMNPEQLWETTMDKSRR
ALLKVSVGNNLEADNVFAVLMGDNVEPRREFITQNALNARNLDI
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagtcgacaagacgcaagctcccgccgacgattacaacgccgactcgatctcc
gtgctcgagggtctggaggccgtgcgcaagcggcccggcatgtacatcggcgacaccagc
gacggctccggcctccacaagatggtcttcgaggtcgtcgacaactcgatcgacgaggcc
ctcgccggttggtgccgcaacatcgaggtcacgatccaccccgacaactccgtctcggtc
gacgacgacggccgcgggatccccgtcggcgcgatggaggtcggcggcaaggtgatggac
gccgcgatcgtcatcctcacggtcctgcacgccggcggcaagttcaacaacaacaactac
aaggtctcgggcggcctccacggcgtcggcgtctcggtcgtcaacgccctgtccgactgg
ctgaagctcgagatctggcgcgacaacaaggtccacaacgtccgcttcgagcgcggcgac
gcggtcacgccggtcgaggcggggggccgcaccgagcgtcgcggcacgcgggttcacttc
caccctgacccgttgatcttcagcaccacggagatcgacttcgaggtcctcgccaaccgc
ttccgcgagctcagcttcctcaaccagggcgtgcggatgcacctgcgcgacctccggagc
ggccgcgagaaggtgttcgacggcgagggcgggatcccgagcttcgtcaagctgctcgcg
cagcacaaggaagtcgtcggcgacctcatcgccttcagccgcgacatcgagttcgagtac
gagggcgagcagaagacgctcggcgtccaggtcgccatgcagtggaccgacgcctaccag
gagacgatcctctgcttcaccaacaacatcgccaaccgcgacggcggcacccacctcacc
ggcttccgcaccgcgctgacgaaggtcgtcaacagctacgccgacagcaccggccagctg
aaggcccacaagaccaacctcgccggcgaagaggtgcgcgagggcctcgtcgccatcgtc
tcgatccgccaccctgacccgaagttcagctcgcagatcaaggacaagctggtctccggc
gaggtcaccagcctggtgtccaccgtcgtcaacgaggagctcggcaagtacctcgaggag
aacccgcgctcggccaagctcgtggtggagcgggcgatcctcgccgcccgcgcgcgcgcg
gccgcccgcaaggcccgtgagaccatcacccgcaagggcatcctcgacggcctgtcactg
ccgggcaagctcgccgactgccaggagaaggcgcccgaacacgccgaaatcttcatcgtc
gagggtgacagcgccggtggctccgccaagcagggccgcgatcgccggacgcaggcgatc
ctcccgctgcgcggcaagatcctcaacgtcgagaaggcgcgcgtcgacaagatgctctcc
agccaggagatcatcaccctcatcaccgcgctcggcaccggcatcggccccgacagctac
gacatcaacaagctgcggtaccacaccatcgtcatcatgacggacgccgacgtcgacggc
tcgcacatccgcacgctgctgctgacgttcttctaccgccacttccccgagatcatcgag
cgcgagcacctctacatcgcccagccgccgctctacaaggtcaaggccggcaaggtcgag
acctacctgaagaacgaggccgcgctcgacgagttcatcatcaataacgccgtcggcgac
ctcgagctcgtcatcggcagccacgccgtctcgggcgaggtgttcgccgcgatcgcccgc
cagggcgcgcgctacaagcagctggtcgagtcgctcgcgcgcgagcaccggtcgcaggtc
gtcgagttcctggtcgacaagctcgaggccgacgccaacctggccgtcagcttcaccgac
gaggcggcggtggccgccctcggcgccgcgctcaaggccgaggtcaccccgcgcatcgag
aacaacccgaccatcgaggtctccgtcgaggccgacccgaccgaccccgcacgcaagcag
ctgcgcgtgcagatcctggtcgacggagtgcgccacgacgagctcgtcaacgtcgagctg
ctcggcggctaccagctcaccgagctgctcaagatccgccgtcagctggtcgactacggc
accggcgatctggccctgcggcgcaagggcgaggtggtcgccagccccaagcgcctgctc
gacgtcgtccaccacatcggcgagctcggccgcagcggcctgcagatccagcgctacaag
ggcctcggcgagatgaaccccgagcagctgtgggagacgacgatggacaagagccgtcgc
gccctcctcaaggtcagcgtcggcaacaacctcgaggccgacaacgtgttcgccgtgctc
atgggcgacaacgtcgaaccccgccgcgagtttattacgcagaacgccctcaacgcgcgc
aacctcgacatctga
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