Nocardioides anomalus: G5V58_00250
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Entry
G5V58_00250 CDS
T07000
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nano
Nocardioides anomalus
Pathway
nano03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nano00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G5V58_00250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nano03021
]
G5V58_00250
03400 DNA repair and recombination proteins [BR:
nano03400
]
G5V58_00250
Enzymes [BR:
nano01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G5V58_00250
Transcription machinery [BR:
nano03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G5V58_00250
DNA repair and recombination proteins [BR:
nano03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G5V58_00250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QIG41408
UniProt:
A0A6G6W7U6
LinkDB
All DBs
Position
47646..51536
Genome browser
AA seq
1296 aa
AA seq
DB search
MLDVNFFDQLRIGLATADDIRTWSHGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDEDARHQDLSSLENKVGLERERLEKRRDQSIEDRSKKLEED
LAALEAEGAKADQRRKVKDGAEREMKQLRDRAQREIDRLEEVWSTFKALKVQDLMGDEML
YREMKNWFGKYFEGHMGATAIQKRLEDFDIAAEVESLRETIATGKGQKKVRALKRLKVVD
AFRKTGNKPQGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVSGPQLKLHQCGLPKMMALELFKPFVMKRLVDLSHAQNIKSAKRMVERAT
SGLSRYAMVWDVLEEVIMEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQIHPLVCGAFNA
DFDGDQMAVHLPLSAEAQAEARILMLSTNNILKPSDGRPVTMPSQDMIIGLFWLTTDREG
EPGEGRAFSSPAEATMAFDRGEITLQSKIKLRLSDAVAPLDFAGEHEEGQPLLLETTLGR
SLFNDTLPADYPYVNYEVGKKALGAIVNDLAERYTKVEVAASLDALKDTGFHWATRSGVT
VSIDDVTTPADKADILAGFETQAANIQKQFERGLITDDERRQELIEIWTDASSKVGDAME
KNFDRTNPIFMMVDSGASGNMNQIRQVAAMRGLVANPKGEIIPRPIKSNFREGLTVLEYF
IATHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTERGLIKRIGVKREDGSV
RKDDNVETSAYARTSAVDITHPETGEVLCAAGEDLGDVKIGELVAAGVEEVSVRSVLTCD
AKTGTCAKCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQG
LPRVVELFEARSPKGVSPITEVTGRVEIEETDKARVVRITPDDGSEPIEYPVSRRSRLRV
ADGDHIEVGDQLVVGTPDPKEVLRILGVRKTQQHLVDEVQQVYRSQGVAIHDKHIEIIVR
QMLRRITVLESGETHLLPSDLVDRVRFEEENRRVVSEGGKPASGRPELMGITKASLATES
WLSAASFQETTRVLTDAAIHGRSDSLRGLKENVIIGKLIPAGTGLERYRNIRVEPTEEAR
AAAYSVTGYDSYDYEFAGSPSQAVALEEFDFGSYQN
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgaccagcttcggatcggcctggccaccgcggacgacatc
cgcacgtggagccacggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagcgcgacggcctcttctgtgagaagatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccggtccaaggtccgccgcgagcggatgggccacatcgagctggccgccccg
gtcacccacatctggtacttcaagggtgtccccagccggctcggctacctgctcgacctc
gccccgaaggacctggagaaggtcatctacttcgcggcgtacatgatcacctcggtcgac
gaggacgcacgccaccaggacctgtcctcgctggagaacaaggtcggcctggagcgcgag
cggctcgagaagcgccgcgaccagtccatcgaggaccgcagcaagaagctcgaggaggac
ctcgcggccctggaggccgagggggccaaggccgaccagcgccgcaaggtcaaggacggc
gccgagcgggagatgaagcagctgcgcgaccgtgcgcagcgcgagatcgaccgcctcgag
gaggtctggagcaccttcaaggcgctcaaggtccaggacctcatgggcgacgagatgctc
taccgcgagatgaagaactggttcggcaagtacttcgagggccacatgggcgccacggcg
atccagaagcgactcgaggacttcgacatcgccgccgaggtggagtcgctgcgcgagacc
atcgcgaccggcaagggccagaagaaggtccgcgcgctcaagcggctcaaggtcgtcgac
gcgttccgcaagaccggcaacaagccccagggcatggtgctggacgccgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggtcggttcgcgacctcggacctc
aacgacctctaccgccgcgtcatcaaccgcaacaaccgcctcaagcggctgctcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctccaggaggccgtcgactcg
ctgttcgacaacggccgtcgtggccgtccggtcaccggcccgggcaaccggccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccgcttccgccagaacctcctcggcaag
cgcgtggactactccggccggtcggtgatcgtgtcgggtccgcagctgaagctgcaccag
tgcggtctgccgaagatgatggcgctggagctgttcaagcccttcgtcatgaagcggctg
gtcgacctgagccacgcccagaacatcaagtccgccaagcggatggtggagcgggcgacc
tccgggctctcgcgctacgcgatggtctgggacgtgctcgaagaggtcatcatggagcac
ccggtgctgctcaaccgcgcaccgacgctgcaccgcctcggcatccaggccttcgagccg
cagctgatcgagggcaaggccatccagatccacccgctcgtgtgcggcgcgttcaacgcc
gacttcgacggtgaccagatggccgtgcacctgccgctgtccgcggaggcccaggccgag
gcccgcatcctgatgctctcgaccaacaacatcctcaagccgtccgacggccggcccgtg
accatgccctcgcaggacatgatcatcggcctgttctggctgacgaccgaccgcgagggc
gagcccggcgagggccgggcgttctcctcgccggccgaggcgaccatggccttcgaccgg
ggcgagatcacgctgcagtccaagatcaagctgcgcctcagcgacgccgtggcgccgctg
gacttcgccggtgagcacgaggaggggcagccgctcctgctcgagaccaccctcgggcgc
tcgctgttcaacgacaccctgcccgccgactacccctacgtgaactacgaagtgggcaag
aaggcgctgggcgcgatcgtcaacgacctggccgagcgctacaccaaggtcgaggtcgcg
gcgtcgctggacgcgctcaaggacaccggcttccactgggcgacccgctcgggtgtcacg
gtctccatcgacgacgtcacgacgccggccgacaaggccgacatcctggccggcttcgag
acccaggccgcgaacatccagaagcagttcgagcgcggtctgatcaccgacgacgagcgt
cgtcaggagctcatcgagatctggaccgacgcgtccagcaaggtcggtgacgcgatggag
aagaacttcgaccgcaccaacccgatcttcatgatggtggactcgggcgcgtccgggaac
atgaaccagatccggcaggtcgccgccatgcgtggtctggtggcgaacccgaagggcgag
atcatcccgcgcccgatcaagtccaacttccgtgagggcctcacggtgctggagtacttc
atcgccacccacggcgctcgcaagggtctggccgacaccgcgctccgcacggcggactcg
ggctacctgacccgtcgcctcgtggacgtctcccaggacgtcatcatccgcgaggacgac
tgcggcaccgagcgcggcctgatcaagcggatcggcgtcaagcgcgaggacgggagcgtc
cgcaaggacgacaacgtcgagacctcggcgtacgcccggacctcggccgtcgacatcacc
cacccggagacgggcgaggtgctgtgcgccgcgggcgaggacctcggtgacgtcaagatc
ggcgagctcgtggccgccggtgtcgaggaggtgtcggtccgctccgtgctgacctgtgac
gccaagaccggcacctgcgccaagtgctacggccgctcgctggccaccggcaagctcgtc
gacatcggcgaggccgtcggcatcatcgcggcccagtcgatcggtgagcccggcacgcag
ctgacgatgcgcaccttccacaccggtggtgtggcctccgcggacgacatcacgcagggt
ctgccccgcgtggtcgagctcttcgaggcccgctcgcccaagggcgtctcgccgatcacc
gaggtcaccggccgcgtggagatcgaggagaccgacaaggcccgcgtcgtgcggatcacc
ccggacgacggctccgagcccatcgagtaccccgtcagccgccgctcgcgcctccgggtc
gccgacggcgaccacatcgaggtgggcgaccagctggtcgtcggcacgccggaccccaag
gaggtgctccgcatcctcggtgtccgcaagacccagcagcacctggtcgacgaggtccag
caggtgtaccgctcgcagggcgtggcgatccacgacaagcacatcgagatcatcgtgcgg
cagatgctgcgccggatcacggtgctcgagtcgggcgagacgcacctgctgccctccgac
ctcgtggaccgcgtgcggttcgaggaggagaaccgcagggtcgtctccgagggcggcaag
ccggcctcgggtcgccccgagctcatgggcatcaccaaggcctcgctcgcgaccgagtcg
tggctgtccgcggcctccttccaggagaccacccgcgtcctcaccgacgcggccatccac
ggacggtccgacagcctgcgcggtctgaaggagaacgtcatcatcggcaagctgatcccg
gctggtaccggcctcgagcggtaccgcaacatccgggtggagcccaccgaggaggcccgc
gccgcggcgtactccgtcaccggctacgactcctacgactacgagttcgcgggttcgccg
agccaggcggtcgcgctcgaggagttcgacttcgggtcctaccagaactga
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