Nocardioides anomalus: G5V58_24965
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Entry
G5V58_24965 CDS
T07000
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nano
Nocardioides anomalus
Pathway
nano03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nano00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G5V58_24965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nano03400
]
G5V58_24965
Enzymes [BR:
nano01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
G5V58_24965
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
G5V58_24965
DNA repair and recombination proteins [BR:
nano03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G5V58_24965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
Zn_ribbon_6
Zn_ribbon_NUD
Zn_ribbon_TFIIB
Zn_ribbon_IS1595
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
QIG45563
UniProt:
A0A6G6WK99
LinkDB
All DBs
Position
5005150..5005959
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVESARAVIERSGLRRTIADVDDADTWVCRPHTPGEIKDALVGRTLTRANRRGKS
IWCDTSDDGPALGIHLGMSGRIHISKPDREDDEGGDYVGTGRRRQARATKPEWDRFTLVF
EDGGSLRLFDKRRLGRVRLDPDIDALGPDAAEVRAPDLRALLGRSHTAVKARLLDQHAIA
GVGNLLADEALWQAAVDPRKPADELTAEEATTLARTLRTSIRRALKNGGVHTGEIIKHRK
RGDHCPRCGAEMQRATVGGRTTWFCSAEQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaggtcgagtccgcccgggcggtgatcgagcgctccggtctgcgc
cgcacgatcgccgacgtcgacgacgccgacacctgggtgtgccgcccgcacacgccgggc
gagatcaaggacgcgctggtcggccgcacgctcacccgggcgaaccgccggggcaagtcg
atctggtgcgacacctccgacgacgggcccgcgctcggcatccacctgggcatgagcggg
cggatccacatcagcaagcccgaccgggaggacgacgagggcggcgactacgtcggcacc
ggccgccggcgccaggcgcgggcgaccaagccggagtgggaccggttcaccctggtgttc
gaggacggcggctcgctgcgcctgttcgacaagcgccggctcggccgggtccggctcgat
ccggacatcgacgccctcggcccggacgccgccgaggtccgcgcgccggacctgcgcgcg
ctgctcggccgctcgcacaccgcggtcaaggcgcggctgctcgaccagcacgccatcgcc
ggcgtcggcaacctcctggccgacgaggccctgtggcaggcggccgtcgacccgcgcaag
ccggccgacgagctcaccgcggaggaggccaccacgctcgcgcgcacgctgcgcacctcg
atccgccgcgcgctcaagaacggtggcgtgcacaccggcgagatcatcaagcaccgcaag
cgcggcgaccactgcccgcgctgtggcgccgagatgcagcgcgccacggtcggcggccgc
accacctggttctgctccgccgagcagtag
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