Candidatus Nanosynbacter sp. TM7-008: LRM48_000190
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Entry
LRM48_000190 CDS
T10994
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nant Candidatus Nanosynbacter sp. TM7-008
Pathway
nant03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nant00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LRM48_000190 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nant03019
]
LRM48_000190 (groL)
03110 Chaperones and folding catalysts [BR:
nant03110
]
LRM48_000190 (groL)
03029 Mitochondrial biogenesis [BR:
nant03029
]
LRM48_000190 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nant04147
]
LRM48_000190 (groL)
Enzymes [BR:
nant01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LRM48_000190 (groL)
Messenger RNA biogenesis [BR:
nant03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LRM48_000190 (groL)
Chaperones and folding catalysts [BR:
nant03110
]
Heat shock proteins
HSP60 / Chaperonin
LRM48_000190 (groL)
Mitochondrial biogenesis [BR:
nant03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LRM48_000190 (groL)
Exosome [BR:
nant04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LRM48_000190 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LRM48_000190 (groL)
Exosomal proteins of breast cancer cells
LRM48_000190 (groL)
Exosomal proteins of colorectal cancer cells
LRM48_000190 (groL)
Exosomal proteins of bladder cancer cells
LRM48_000190 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
XRW97854
LinkDB
All DBs
Position
34738..36381
Genome browser
AA seq
547 aa
AA seq
DB search
MAKKVFYDDDARNRVLGGAKSLYDAVKVTYGPKGRNVVIAKGFGGPTVTHDGVTVAEGIE
LPENDDETLGHKVGADLIKQAAKNLNKQAGDGTTTVTVLTYSILKEANRLIAAGHNPMEL
RKGIEQAGAEIVKELNKLAEPIEGKSDRVAEVATISAGDAEIGKLIAGVIEKVGKDGVVT
VEAGQGLELEAEVVEGFSLDKGWVSPFFVTDAGRQEAVYEKPAILITDKKISSVQEFLPM
LEKLAQSGKKDVVLIADEVEGEALSILVLNKLKGVFNTVAVKAPSFGDRRKDVLRDIAVL
TGATVISEDHGLTFGNAGLEVLGSARKVIVGKDETTIIEGAGKPSGVKERIAEIKSLSEN
ASSEYEKEQFDKRAAALSGKVAVIKVGGATETEIDEKKFRVDDAVAATKAALAEGIVAGG
GVTLVNLAGNLKVSGADSLSVGRQTLKDALKQPFLQIMKNAGLNADALLAQVESGKPGFG
VNVMKPEDGLIDVKKAGVIDPARVTKEAVQNAVSIASTAATMGALVVDIPEAEVAAAPGG
MPGMGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaagttttttatgatgacgatgcgcgaaatcgcgtgcttggcggagctaaa
tcgctatacgacgcagttaaggtaacttacggtccgaagggtcgcaatgttgtgattgcg
aagggttttggcggtccaacggttactcatgacggcgtaactgtggctgaaggaattgaa
ttgccagaaaacgatgacgaaacgctgggtcacaaagtcggtgctgatttaatcaagcag
gccgctaagaatttgaataagcaagcaggcgacggcacgacgaccgtaacagtgctaaca
tattcgattttgaaagaggcaaatcgattgattgcggctggacataatccgatggaactt
aggaaaggcattgagcaagctggcgcggaaattgttaaagaattgaacaaattggctgag
ccgattgaaggcaagtctgaccgcgtggctgaagtcgctacgatttcggcgggagatgcg
gaaatcggtaaattgattgctggcgtaatcgagaaagtcggtaaagacggcgtggttact
gttgaggctggtcaaggtttggagctggaagctgaagttgtcgaaggttttagcttggac
aagggttgggtgagtccgttctttgttactgacgcaggtcgtcaggaggctgtgtacgaa
aagccagcgattttgattaccgataagaagatttctagcgtgcaggaattcttgccaatg
ttggaaaaattggcacaaagcggtaagaaagacgtggttttgattgctgacgaagttgaa
ggcgaggcgttgagtattttggtcttgaacaagctgaagggtgtattcaacaccgtagcc
gttaaggcgccaagtttcggcgaccgtcgtaaagatgttcttcgtgatatcgccgtgctg
actggcgcgactgtgatttctgaagatcacggattgacgttcggaaacgctggcttggaa
gttttgggatcggcacgtaaggtgattgttggtaaggatgaaacgacaatcatcgaaggc
gcgggcaaaccttcaggcgtgaaggagcgaattgctgagattaagtcgctttcagagaat
gcttcaagtgagtatgaaaaagagcaattcgacaagcgcgctgcggcattgtctggcaag
gttgcggttattaaggttggtggcgcgactgagacggaaattgacgagaagaaattccgc
gttgatgacgctgtggcggctactaaggcggctttggctgagggaattgtcgctggtggc
ggcgtaactttggtcaatttggctggcaatctaaaagttagcggcgcggatagtttgtcg
gtcggtcgacaaaccctaaaagacgctctgaagcaaccgttcttgcagattatgaaaaac
gctgggttgaatgctgatgcactacttgctcaagttgaatctggcaaacctggatttggc
gttaacgttatgaagccagaagacggtctgattgacgtgaagaaggctggtgttattgat
ccagctcgtgtgactaaagaggctgttcaaaatgcagtgtcgattgcgtcaactgcggca
actatgggcgctttggtggttgatatcccagaggctgaagttgcagctgctcctggcggc
atgccaggaatgggtatgatgtaa
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