Candidatus Nanosynbacter sp. TM7-008: LRM48_000340
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Entry
LRM48_000340 CDS
T10994
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nant Candidatus Nanosynbacter sp. TM7-008
Pathway
nant03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LRM48_000340 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nant03400
]
LRM48_000340 (mutM)
Enzymes [BR:
nant01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LRM48_000340 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LRM48_000340 (mutM)
DNA repair and recombination proteins [BR:
nant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LRM48_000340 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
Ribosomal_S13
DUF6933
Motif
Other DBs
NCBI-ProteinID:
XRW97883
LinkDB
All DBs
Position
64881..65759
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AA seq
292 aa
AA seq
DB search
MPELPEVETVRRGLADLLPGQAVARATVFDSPKSFPNSPTDVQQFLYGAHVMAVRRRAKV
LMIDLDTRYSLVIHLKMTGQLIFRGANSFAGGHPNDSLIGELPDKSTRVQIDFADGSRLF
FNDQRKFGWMKLMPTDEIENLPFMQKVGPEPLDKKTEAMDFIKRIRRRQNSMIKPAFLDQ
SVIAGVGNIYADEALWAAKIHPQTRVRNVSDDQLEDLFNELRQILQLSIDQGGSTDKNYV
DAEGRKGNYLSFAHVFRREGQPCHRHPDQEIVKMKVSGRGTHICPVCQVEVK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactacccgaagttgagacagttcgtcgcggtttggcggatttattgccaggt
caggctgttgcgcgagcgacggtatttgattcgccaaaaagctttcctaattcacctact
gatgttcagcaatttttatacggcgcgcacgtaatggcagtgcgacgtcgtgcgaaagta
ctgatgattgatcttgatacgcgttattcgctggtgatacatcttaagatgactgggcaa
ttgatttttcgtggggctaatagttttgctggcggtcatccgaatgatagcttgatcggt
gaattgccggataagtcgacgcgtgtgcaaattgattttgcggatggttcgcgtctgttt
ttcaatgatcagcgtaagtttggctggatgaaattgatgccgactgatgagatagaaaat
ttgccatttatgcagaaagttgggccggagccgctcgataaaaaaactgaggcgatggac
tttattaagcgaattcgtcgtcgacaaaattcgatgataaagccagcgtttcttgatcag
tcggtaatcgctggagttggcaatatttacgctgatgaagctctgtgggctgcgaaaatt
caccctcagacgcgcgttaggaatgttagtgatgaccaattggaagatttgtttaacgaa
ctgcgtcagattttacaattgagcattgatcagggtggctcgacggataaaaattatgtt
gacgctgaaggcagaaaagggaattatctgtcgtttgcgcatgtatttcgtcgagaaggt
cagccgtgtcatcgacaccctgaccaagagattgtaaagatgaaagtttctggacgcggt
acgcatatttgcccagtttgccaagtggaggtgaagtga
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