Candidatus Nanosynbacter sp. TM7-008: LRM48_000470
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Entry
LRM48_000470 CDS
T10994
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
nant Candidatus Nanosynbacter sp. TM7-008
Brite
KEGG Orthology (KO) [BR:
nant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nant03009
]
LRM48_000470
Enzymes [BR:
nant01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
LRM48_000470
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
LRM48_000470
Ribosome biogenesis [BR:
nant03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LRM48_000470
23S rRNA modification factors
LRM48_000470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_23
SYY_C-terminal
PrmA
Methyltransf_25
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
XRW97906
LinkDB
All DBs
Position
88664..89386
Genome browser
AA seq
240 aa
AA seq
DB search
MKQRLDKALVERGLATTRSQADNFIRLGYVFLNKKIVQKSGTMVSDSDEIKLEKKETYVS
RAGLKLASVAEYFHLNFQDKTVLDIGSSTGGFTDYSLRHGAKKVFAVDVGTDQLHPSLRP
NPKIVLHEKTDIRDFYTDEAIDIIVGDVSFISLREILPHVAENLMNSGTVLIAMVKPQFE
AGRHQVNKGIIKNDKVRRQILSDFEDWAKKYFVILDKKDSEVAGSKGNLERFYKLKLSKR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagcgattagataaagctctggtcgagcgcggtttggcgacaacaagatctcag
gcggataattttattcgcctgggctatgtttttttgaataagaaaattgtccaaaaatca
ggaactatggtatctgattcggacgagataaagctcgagaagaaggaaacttatgtttcg
cgagccggcttaaaactggcaagcgtggcggagtattttcatcttaattttcaggataaa
accgttctggatattggttcgagcacgggtggatttactgactattcactgcgtcatggc
gctaaaaaggtatttgctgttgatgttggaacggatcagctccatccaagcttgagaccg
aatccaaaaattgttcttcacgaaaagaccgatattcgtgatttttatacagatgaagca
attgatattattgtgggcgatgtgtcgtttatatctctgagggaaattttgccgcacgtg
gcagaaaatctgatgaatagcggcactgttttaattgctatggtgaagcctcaatttgag
gcggggcggcatcaggttaataagggaattattaaaaacgataaagttcgccgacagatt
ttatccgattttgaagattgggcgaaaaagtattttgttatcttagataaaaaagatagt
gaagtggctggcagtaagggcaatcttgagcgattttacaaattgaaattatctaaacgt
taa
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