Candidatus Nanosynbacter sp. TM7-008: LRM48_000680
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Entry
LRM48_000680 CDS
T10994
Name
(GenBank) DNA topoisomerase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nant Candidatus Nanosynbacter sp. TM7-008
Brite
KEGG Orthology (KO) [BR:
nant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nant03032
]
LRM48_000680
03400 DNA repair and recombination proteins [BR:
nant03400
]
LRM48_000680
Enzymes [BR:
nant01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LRM48_000680
DNA replication proteins [BR:
nant03032
]
Prokaryotic type
DNA Topoisomerases
LRM48_000680
DNA repair and recombination proteins [BR:
nant03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LRM48_000680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
XRW97943
LinkDB
All DBs
Position
127336..129324
Genome browser
AA seq
662 aa
AA seq
DB search
MAKQTNEQSYDGSQIQVLEGLEPVRKRPGMYIGSTGYEGVHHLIKEIADNSIDEAIAGYA
TKVEVTLLKDGGVRVSDDGRGIPVDKHPKTGKSTLETVLTILHAGGKFGGGGYKVSSGLH
GVGSSVVNALSTRMIAEVRKNGKIYRQEYATGVPQTELEVVGKSDGSGTTITFYPDPTIF
KETVNFDYKWVVNYLRHQAYLTKGIHTSVIDERTGERKAFYFEGGIQSYVKNLNIGKDVL
SDDIFYVEKQVEDCMVEIAVQYNDTYAEVVKPFANNVLTPDGGTHLVGFRTALTRVINDY
ARKNSLLKEKEDNLTGDDIREGLTAVILVKLPDPQFEGQTKNKLGNPEMRRYVDQVMSEY
FAYYLEENPATAKKVVGKATLAARARKAARAARDNVIRKGAFEGLNLPSKLTDCSSRNRK
DCELFIVEGNSAAGSAKDGRDSTIQAVLPLRGKVLNTERARFDKMFANAEIVSLIKAMGV
GIGDQFDISGIRYDKIIFMTDADVDGAHISTLLMTFFFRYMSEVIEAGHVYLAKPPLFGL
SRGTGSNRKIDYVYDEVALEQKLNEKINERKAAGVKIDENAEKFKQAGYTAQQRFKGLGE
MDAAQLWETTMNPENRTLVKVNIEDAERADAIFTKLMGDSVELRKNFIQTNAAKVNVEDL
DF
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacaaacaaatgaacaatcttatgatggctcacaaatccaggtcctagagggt
cttgagccggttcgtaagcgtccaggaatgtacatcggtagtacgggatatgagggcgta
catcacttgattaaggagattgccgataactcaattgacgaggcaatcgctggttatgct
acaaaggtcgaagtaactttgttaaaggatggcggcgttcgagtatctgatgacggtcgt
ggcattcctgtcgataaacacccaaagacaggtaagagtacattggagacggtattaaca
atcttacatgccggtggtaagtttggtggcggtggctataaagtttcatctggacttcac
ggtgttggttctagtgttgtgaatgcattgtctacgcggatgattgctgaagttagaaag
aatggtaaaatctatcgccaagaatacgcaacaggcgtgcctcagacagaattagaggta
gtcggaaagtctgatggttctggtacgacaattacattttatccagacccaaccatcttt
aaggagacggttaattttgactataaatgggttgttaattatcttcgtcatcaggcgtac
cttacaaaaggcattcacacgtcggttattgatgagcgaactggcgagcggaaagctttc
tactttgagggcggtattcagagttatgtaaaaaacctgaacatcggaaaggatgtttta
tcggacgatatattttacgtcgagaagcaggttgaagattgtatggtggaaattgcggtt
cagtataatgacacttacgctgaagtggtaaagccatttgccaataacgtcttaactccc
gatggcggtactcatttggttggttttcgaacagctctcacgcgtgtaattaatgattat
gctcgtaagaatagcctactgaaagaaaaagaggataatctgactggtgatgacattcgt
gaaggtttgacggcggttattttggtgaaattgccagatcctcagtttgagggtcagact
aagaataaacttggtaatccagagatgcgtcgctatgttgatcaggtgatgagcgaatat
ttcgcgtattatttggaggaaaatccagctacagctaagaaggttgtcggcaaggctaca
ttggcagcacgagctcgtaaggcggcaagggctgcgcgcgacaacgttatccgtaaggga
gcatttgagggcttaaacttgccatctaaattgacggattgctcatctcgtaatcgaaaa
gattgtgaattatttattgtcgagggtaattctgctgcgggttcagctaaggatggccgc
gattcaactattcaggctgttcttcctcttcgcggtaaggtgttgaatacggagcgcgca
aggtttgataagatgtttgctaatgctgaaattgtttcgttgattaaggctatgggtgtt
ggaattggcgaccaatttgacattagcggcattcgttacgacaagattatatttatgaca
gatgccgacgttgacggtgcgcacatttctacgcttttgatgacattcttcttccgatat
atgtctgaagtgattgaagcgggtcacgtatatctagcgaagccgcctctgtttggactg
agtagaggaactggcagtaatcgtaagatagattacgtctatgatgaagtagccctcgag
caaaaattgaacgaaaaaatcaatgagcgcaaggccgctggtgtaaagattgatgaaaat
gctgagaaatttaagcaggcaggctacacggcacaacagcgatttaagggtcttggtgag
atggatgccgcccaattatgggaaacgactatgaatccagaaaatcgaacattagtgaag
gttaatattgaggatgcggaacgggcagacgcgatatttacgaagcttatgggtgatagt
gtagaattgaggaaaaattttattcaaacaaatgccgctaaggttaatgtggaagatttg
gacttttaa
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