Candidatus Nanosynbacter sp. TM7-008: LRM48_001200
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Entry
LRM48_001200 CDS
T10994
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
nant Candidatus Nanosynbacter sp. TM7-008
Pathway
nant03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LRM48_001200 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nant03400
]
LRM48_001200 (recO)
DNA repair and recombination proteins [BR:
nant03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LRM48_001200 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LRM48_001200 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
XRW98039
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All DBs
Position
226900..227580
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AA seq
226 aa
AA seq
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MTGQSERVKAIVLRRTNYAEADRVLQLLTPKGRRSVIAKGVRRERSKLAGGIELFAICDV
VIRSGRGDLGLLTSARLSAFYRHILEDYDRMQFAYSVMKLVSAASENIDEPEWYYVLSQV
LEQLNNPAINQKLIETWFYLQYASLLGDELNLRTDVTTAALLPDKKYMYDSAEKGLRLAE
QGDLGADAIKLLRLIQAKPLANVAQIGGITEVINDCWLTARQHAAV
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgacggggcagagtgaacgagtaaaagcaattgttctgaggcgaacgaattacgccgaa
gctgaccgagttttgcaattattaacgccaaaaggtcgacgtagcgtaatcgccaaaggc
gtgcgtcgggagcgcagtaaattagcgggcggaattgaattattcgcgatttgtgatgtg
gttattcgttctggtcggggcgatttggggctattaacttccgctcgattgtcggctttt
tatcggcatattttggaagattatgatcggatgcaatttgcgtattcagtaatgaaattg
gtctctgcggcgagtgaaaatattgacgaaccagagtggtattatgtgctgagtcaagtt
ttggagcaattgaataatcctgcaataaaccaaaaattgattgaaacgtggttttatttg
caatacgcgagtctgctgggagatgagctgaatcttcgaacggacgtaacgactgcggcg
ctgcttcctgataaaaaatatatgtacgatagtgcggaaaaaggtttgagattggcggag
cagggcgatttgggcgcggacgcaatcaaattgttaaggttaatccaggccaagcctctg
gcaaatgtggcgcaaatcggcggaataactgaggttataaacgattgttggttgaccgcc
agacagcacgcggcagtgtaa
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