Candidatus Nanosynbacter sp. TM7-008: LRM48_001250
Help
Entry
LRM48_001250 CDS
T10994
Name
(GenBank) PIF1 family DEAD/DEAH box helicase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
nant Candidatus Nanosynbacter sp. TM7-008
Brite
KEGG Orthology (KO) [BR:
nant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nant03032
]
LRM48_001250
03029 Mitochondrial biogenesis [BR:
nant03029
]
LRM48_001250
Enzymes [BR:
nant01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
LRM48_001250
DNA replication proteins [BR:
nant03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
LRM48_001250
Mitochondrial biogenesis [BR:
nant03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
LRM48_001250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
AAA_22
Viral_helicase1
TrwB_AAD_bind
AAA
AAA_16
AAA_14
DEAD
Pif1_2B_dom
AAA_24
ATP-synt_ab
SLFN-g3_helicase
SH3_13
MeaB
ATPase
IstB_IS21
RsgA_GTPase
UvrD_C_2
nSTAND3
YqeC
Herpes_Helicase
Helicase_RecD
AAA_7
AAA_11
MobB
CobA_CobO_BtuR
AFG1_ATPase
T2SSE
cobW
ABC_tran
NACHT
HerA_C
ResIII
AAA_5
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
XRW98048
LinkDB
All DBs
Position
235828..237081
Genome browser
AA seq
417 aa
AA seq
DB search
MDQELALAILLSGRSALLTGAAGTGKTYLLNTFIAQARKRGKKVSVTATTGLAATHLGGN
TIHSWSGIGVSDHLPNNFFERLSKTRRDVISKTDVLIIDEISMLHDFRLDMIDKVLRTVR
ENDRPFGGIQLVMSGDFFQLPPVNRPNEQGGGFVVYSDAWQELQPAVLYLERQYRQNDEQ
LLEILTALRTGDVRRRHVEALLARTEIEPPDGDITELHTVNVDVDDINIQKLAELPGEER
SYQQTTTGSKIYVENLQRSVLAPENLVIKLGALVMAVKNSPQKLYANGSIGTVVDFEPLT
EYPVVEFRDGRRVTMVPDVWELRDGERKRASISQVPLRLAWAITVHKSQGMTLDVAKIDL
RKAFVEGMGYVALSRVRDLDNLYLYGINRRALEVSPDALAIDEVLRRASRESVERYK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagaattagcgctggctattttactgagcggtcggtcggcgttgctgactggt
gcggctggaacgggcaaaacttacctgttgaatacttttattgcgcaggcgcgaaaacgg
ggtaaaaaggtgtcggtaacagcgacaactggtctggcggctacgcatcttggcggcaat
acgattcacagctggagtggtattggcgtgagtgatcatttgccgaacaatttttttgaa
cgattgtcaaaaacgcggcgtgatgtgatttctaaaactgacgtgctgattattgacgag
atttcaatgcttcacgattttcggctggatatgattgataaagttttaagaaccgtcagg
gaaaatgatcggccatttggtggcattcagttggtgatgagcggcgactttttccaattg
ccgccagtgaatcgtccgaacgagcagggcggcggttttgtggtttattctgatgcttgg
caagaacttcagccggcggttttatatttggagcgacaatatcgtcagaatgatgagcag
cttttggagattctgaccgctctaagaactggcgatgttaggcgacgtcacgtcgaggcg
ttgttggcgcgcacggaaattgagccgccagatggcgacattacagagctgcacaccgta
aacgtcgatgttgatgatatcaatattcaaaaattggcggaattaccaggagaagagcga
tcgtatcagcaaacgacgacgggctcgaaaatttatgtagagaatctgcaaaggtcggtt
ctggctccagaaaatctggtgattaagctgggcgcgttggtgatggcggttaaaaattcg
ccacaaaaattatatgccaatggtagcattggaacggtagttgattttgagccgttgacg
gaatatccggttgttgagtttcgagacggtcgtcgggtgacgatggtaccggatgtttgg
gaattgcgggacggagagcgcaaacgagcgagtatttctcaggttccgctgcgtttggcg
tgggctataacggttcacaaaagtcagggaatgacgctggatgtggctaagattgacctg
aggaaggcgtttgttgagggtatgggttatgtggctttgagtcgcgtgcgagatttggac
aacttatatctatacggaattaaccgtagggcgctggaagtttctcctgacgcgctggca
attgatgaggtcttgaggcgggcgagtagagagtctgttgagagatataaatag
DBGET
integrated database retrieval system
