Candidatus Nanosynbacter sp. TM7-008: LRM48_001405
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Entry
LRM48_001405 CDS
T10994
Name
(GenBank) type IV secretion system DNA-binding domain-containing protein
Organism
nant Candidatus Nanosynbacter sp. TM7-008
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Paralog
GFIT
Motif
Pfam:
DUF8128
TrwB_AAD_bind
DUF87
TraG-D_C
T4SS-DNA_transf
AAA_10
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
XRW98078
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Position
complement(265525..268173)
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AA seq
882 aa
AA seq
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MQIISWIISTLLQWYVWMPIVAVLMFLTWRNYRKIEDFTPVESVLLILEIPRTNDKQELA
AEQLFASLHGILRDNKELRLSGGHQEHISFEIASVNGQIRFYVWVPKTLQSFVEGQIYSQ
YPTVQIHQADEDYTEHERNHEVAYSTELTLTTDEFLPIRTFQNFEVDPLAGITGTLAKLE
TTGEELWIQVLVRPIPDDWQNAADRYINSIKNGRIFSLPGFGGSMQWLIGILGALWQPPE
QGVGQSTKIELSDRDKTRISEAEKKATKLGYEVKIRLVYMGESQTNAKLRMQALVGTFKQ
FNSTNLNGFHAVKGAFGKEFIDKYRKRSFIGDGFILNIEELASVFHLPHTNVETPNIVWA
SSKTAEPPSKLPVLTGEDVNDDQISAFGVTNFRGISHQFGMLRYDRSRHVYIIGQTGAGK
SGLLELFALSDIFHNQGYAIIDPHGDFAINNMKFIPGSRLNDVIYFNPADTAYPLGFNPL
EVTNPNQKTNISSEIIGVLKRIFGDSWGPRLEYILRYTILALLDRPEATMLDITRMLTDK
EFRKETLTYCQDTVVLQFWNVEFASWNDKFVAEAIAPVLNKVGAFTANPIIRNIIGQPKS
TFNIRQIMDEGKILIVNLSKGLIGEDNAAILGSFLVTKIQLAAMSRSDIPDVRDRRPFYL
YVDEFQNFATDSFATILSEARKYGLNLTVANQYISQMSDTVRDAVFGNVGTMISFRVSAD
DAPILAKQFEPNFEAIDLLQMHNRNFVVNMVIGGEKTPAFSARTLELPPSQADNTPHIIE
HSRRMYSRNREDVEKEIDAAIKPVRNQKKQPAKPQPQPANNAPAVNSQPEKPQPTANDGE
VVLQIRSNDNVTTETVVNTVTPLASATPKRRRRRRKKNTTAD
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgcagattatttcttggatcatcagcacactattgcaatggtacgtttggatgccaatc
gtggcagtcctgatgtttttgacgtggcggaattatcggaagatcgaagattttacccca
gttgagagcgtgcttttaattctggaaatcccacgcaccaacgacaagcaagaacttgcc
gccgagcagctattcgcttcactacacggaattcttcgcgataataaagaattgcgatta
tctggtggacaccaggagcacatcagctttgaaatcgcctcagtcaatgggcaaattcgc
ttttacgtttgggtgccaaaaaccttgcagagctttgtcgaaggacagatttattctcaa
tatccaaccgttcaaattcaccaagccgacgaagattacaccgagcacgagcgcaaccac
gaagttgcttactcgacagaattgacattaaccacagatgaatttctcccgattcgcacc
ttccaaaactttgaagtcgacccgctggcaggcattacgggcacgctggcgaaattggaa
accaccggtgaagaattgtggattcaggtgctagtcagaccaattcctgacgactggcaa
aacgccgctgaccgatatatcaatagcataaaaaatggacgaatattctccttgccgggg
tttggcggcagcatgcagtggttaatcggcatacttggcgcgttatggcaaccgccagag
cagggagttgggcaatcaaccaaaatcgagctgtcagatcgcgataaaactcgcatttct
gaagcagagaaaaaagcaaccaagctcggctacgaggtaaaaattcgcttggtttatatg
ggcgaaagtcagacgaacgctaagcttcgtatgcaggcgcttgtcggtacatttaagcag
ttcaactcgacaaatctcaacggatttcacgctgtcaaaggcgcgtttggtaaagaattt
attgataaatatcgcaagcgttcgttcatcggcgacggttttatcttaaatatagaagaa
ttggcgtcagtttttcacttgccacacaccaacgttgaaacgccaaatatagtttgggcg
agctccaaaaccgcagaaccgccatccaaattgccagtcttaaccggcgaagacgtcaac
gacgaccaaatttccgcctttggcgtcaccaacttccgcggcatcagccaccaattcggc
atgttacgctatgaccgctcacgccacgtttacataatcgggcaaacgggcgccggaaaa
agtggactattagagctcttcgccttaagcgacattttccataatcaaggatatgccatc
atcgacccgcacggcgacttcgcaatcaacaacatgaaatttatccccggcagccgatta
aacgacgtaatctatttcaatccagccgacaccgcgtatcctctgggattcaacccgcta
gaagtcacgaacccgaaccaaaaaaccaacatctcatcagagatcatcggcgttttgaag
cgtattttcggcgattcgtggggaccgcgacttgagtatattttgcgatacactatttta
gctttgctggatcgaccagaagcgacaatgcttgacattactcgtatgctaacagataag
gaattccgaaaagaaacgctgacttattgccaagacaccgtggttttgcaattctggaat
gtcgaatttgctagctggaatgacaagtttgtcgccgaggcaattgcaccagtcttaaat
aaagtcggggctttcactgccaatccaatcatccgcaacatcattgggcagccgaaatcc
acgttcaatattcgccagattatggacgaaggaaagattctaattgtcaatctgtccaaa
ggtcttatcggtgaagataatgctgccatcctcggttcgtttttggtcacgaaaattcag
cttgccgccatgtctcgaagcgacattcctgacgtgcgcgaccgccgcccgttctatctt
tacgtcgacgagttccagaacttcgccaccgattcgtttgcgactattctgtccgaggct
cgaaaatatggccttaatttgaccgttgccaaccagtacatttcccagatgagcgacacg
gttcgcgatgcagttttcggcaacgtcggcaccatgatttctttccgagtttctgctgac
gatgcaccgattcttgccaagcaattcgagccgaacttcgaggcaatcgacctgcttcaa
atgcacaatcgtaattttgttgtcaatatggttatcggtggcgagaaaactcccgcgttt
tctgcccgcacattggaacttccgccaagccaagccgacaacacgccgcacattatcgaa
cattcacgtcgcatgtattcgcgaaacagggaagatgtcgagaaggaaattgacgccgca
ataaagcctgttcgcaatcagaaaaaacagccggccaaacctcaaccgcagcctgcaaac
aacgctccagcggtcaatagccaaccggaaaagccacagcctacagctaacgacggtgaa
gttgttctgcaaattcgcagcaatgataacgtgaccacagaaaccgtagtcaatacagtt
acaccgctagcttcagccacaccaaaaagacgacgtcgccgacgaaaaaagaacactacc
gccgactaa
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