Candidatus Nanosynbacter sp. TM7-008: LRM48_002930
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Entry
LRM48_002930 CDS
T10994
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
nant Candidatus Nanosynbacter sp. TM7-008
Pathway
nant03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LRM48_002930 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nant03400
]
LRM48_002930 (uvrA)
DNA repair and recombination proteins [BR:
nant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LRM48_002930 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LRM48_002930 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
AAA_33
nSTAND1
AAA_23
AAA_21
DnaJ_CXXCXGXG
nSTAND3
Viral_helicase1
cobW
NACHT
DNA_ligase_ZBD
BrxC-PglY_N
Motif
Other DBs
NCBI-ProteinID:
XRW97638
LinkDB
All DBs
Position
complement(534216..537029)
Genome browser
AA seq
937 aa
AA seq
DB search
MAEVIRVKGAREHNLKNVDIEIPRDQLVVITGLSGSGKSSLAFDTIYAEGQRRYMESLNS
YARQFLGTMDKPDVDSIEGLSPAISIDQKSTSRNPRSTVATVTEIYDYLRLLFARIGVPH
CPICGNEVTRRTTEVIIDEILRQFVDKRILLLAPIVKNKKGEFAHIPEQYQRLGYARVRV
DGVVYALDEFPELQKSYKHNIELVVDRLVLTAEMRSRLSQSVEQALDLGQGVIEVLDADS
DEVKTFSQRYACVDHPDVDIPELEPRLFSFNAPQGACPVCTGLGSRLEVDPELVFNNNLT
ISEGAIRPYNRMNSDAWNMKRLASVAEAHGFSLKIPVGKLSDDVKHKILYGTGDQKYRVD
LGGGRHYDTTYEGVIPNLERRWKETDSDFMRRDIERFMRERDCYACKGARLKPVVLAVTV
HGLNIVDVCDLSVDDALDLFDNKLQLTEQEMTIARLIVKEIKSRLAFMSNVGLNYLELSR
AANTLSGGEAQRIRLATQIGAGLQGVLYVLDEPSIGLHQRDNDKLIDMLKRLRDLGNSVL
VVEHDEDTIRQSDFLVDMGPGAGVNGGQVVAMGTPEIVAKNENSITGRYLSGAEKIAVPK
KRRKVVKDKKLIVRGARENNLKNIDVEFPLGLMTVVSGVSGSGKSTLVNDIVARELAAEL
NRATTAPGLHDVIEGVNLLDKTIVIDQSPIGRTPRSNPATYTGIFTPIRELFASTPEANV
RGYKSGRFSFNVKGGRCENCQGDGVIKIEMHFLPDVYVQCDECHGKRYNREALEIKYKDK
TIADVLDMTIDQAAEFFDSVPNIARKLQTLVEVGLGYIKLGQPATTFSGGEAQRIKLATE
LSKRSTGKTMYILDEPTTGLHSADVKRLLGILQQLVEGGNSMIIIEHNLDVIKSADWIID
MGPEGGIGGGTVVACGTPEDIAKVPNSFTGKYLKKML
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggtaattcgtgttaaaggtgctcgtgagcacaatttgaaaaatgtagatatt
gagattccgcgagatcagctggtggtgattactgggcttagtggatctgggaaatccagc
ctggcatttgacacgatttacgccgaaggtcagcgtcgctatatggagagcttgaattct
tatgcgcgtcagtttttggggacgatggataagcctgatgtcgattcgattgaagggctt
agtccagcgatttcaattgaccagaagtcgaccagccgcaatccgcgttctactgtggct
acggtgacggaaatttatgattatctgaggcttttgtttgcgcgaattggcgtgccgcat
tgtccgatttgtggcaatgaagtgacgcgtcgcacgaccgaagtgattattgatgagatt
ctgcggcaatttgttgataagcgaattttgttattggcgccaattgttaagaataaaaaa
ggtgagtttgcgcacattccggagcaatatcagcgacttggttatgccagggttcgcgtg
gacggcgtggtgtatgcactggatgaatttccggagctgcaaaaaagttacaagcataac
atcgagctggttgttgataggttggtgttgacggcggaaatgcgatctcgactaagtcag
agcgttgagcaagcactggacttaggccagggagttatcgaggttttggacgcggatagc
gacgaagtgaagacgttttcgcagagatacgcttgtgttgatcatcccgatgtcgatatt
ccagagctggagccgcgactgtttagttttaacgcgccgcagggagcttgtcctgtgtgt
acgggtttggggtcgaggctggaggttgatccagaattggtctttaataacaatttgaca
atttccgaaggcgcaattcgaccgtacaatagaatgaattctgacgcttggaatatgaag
cgattggcgtctgttgctgaagctcacggattcagtttgaaaattcccgtaggcaaactt
tctgatgatgttaagcataaaatattatacggaactggcgaccaaaaatatcgcgttgat
ttgggcggcggtcgacattacgatacgacttatgagggtgttatccctaatctagagcga
cgctggaaagaaactgatagcgattttatgcgacgagatattgagcgatttatgcgcgag
agggattgttatgcttgtaaaggtgcgcgcctgaaacctgtggttttggcggtgacggtt
catgggttgaatattgttgacgtgtgcgatttgagtgttgatgacgcattggatttgttt
gacaataagcttcaattgactgagcaagaaatgacgattgctcgcttgattgtgaaggag
attaaatctcgtttggcgtttatgagtaatgttgggctgaactatttggagctaagtcga
gcggctaacacattgagcggtggcgaggcgcagcgaattcgcttggcgacgcaaattggc
gctggacttcagggcgtgctttatgtcctggatgagccgtcaattggacttcatcaacgc
gacaacgacaagttgattgatatgctgaagcgccttcgtgatttgggaaattctgtgctg
gtagttgagcatgacgaggacacgattcgtcagagtgattttctggttgatatgggacca
ggagctggtgtgaatggcggtcaagtagtggcaatggggacgcctgaaattgttgcgaaa
aatgagaatagtataacgggtcgctatttatctggggcggaaaaaattgccgttccgaaa
aagcgtcgcaaagttgtgaaagataaaaagttgattgttcgtggtgctcgcgaaaataat
cttaagaacattgatgtggagtttcctttgggtttgatgactgtagtgtctggtgtttct
ggtagcggaaagtcgacgcttgtgaatgatattgtggcgcgggaactagcagcagaactt
aatcgcgcaacgacagcgccagggttgcacgacgttatagaaggtgtgaatttgcttgat
aagacgattgtcatagatcagtcgccgattggtcgaactccgcgctctaatccagcaaca
tatactgggatttttacgccgattcgcgaactttttgccagcactcccgaggctaacgtt
cgaggctataaatctggacgatttagttttaacgttaaaggtggtcgctgtgaaaattgt
cagggcgatggtgtgataaagattgaaatgcactttttgccggacgtttacgttcaatgt
gacgagtgtcatggcaagcgttataatcgcgaggcgctggaaattaagtataaggacaag
acgattgctgatgttctggatatgacaatcgatcaagcggcggaattttttgacagcgtg
ccgaatattgcgcgtaaacttcagacgttggttgaggttgggcttggctatattaaactt
ggtcagccagcaactaccttttcaggcggtgaggcacagcgaattaaattggcaacggag
ctttccaagcgttccactggaaaaactatgtacattctggatgagccgaccactgggctt
cattctgctgacgtaaaacgattgttggggattttacagcaattggttgaaggtggcaat
agtatgattatcattgagcataatttggatgtcataaagtcggctgactggataattgat
atgggtccagaaggcggaattggtggtggtaccgttgtggcttgtggtacgcctgaagat
atcgccaaagtgccaaattcgttcactggcaaatatctgaaaaagatgctttaa
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