KEGG   Candidatus Nanosynbacter sp. TM7-008: LRM48_003150
Entry
LRM48_003150      CDS       T10994                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
nant  Candidatus Nanosynbacter sp. TM7-008
Pathway
nant00260  Glycine, serine and threonine metabolism
nant00630  Glyoxylate and dicarboxylate metabolism
nant00670  One carbon pool by folate
nant00680  Methane metabolism
nant01100  Metabolic pathways
nant01110  Biosynthesis of secondary metabolites
nant01120  Microbial metabolism in diverse environments
nant01200  Carbon metabolism
nant01230  Biosynthesis of amino acids
nant01240  Biosynthesis of cofactors
nant04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:nant00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    LRM48_003150 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    LRM48_003150 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LRM48_003150 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    LRM48_003150 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    LRM48_003150 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    LRM48_003150 (glyA)
Enzymes [BR:nant01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     LRM48_003150 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase
Other DBs
NCBI-ProteinID: XRW97676
LinkDB
Position
578979..580247
AA seq 422 aa
MKDKQIEELIKAEKKRQTDGLELIPSENYVSSDVLQALGSVFTNKYSEGYPGRRYYGGQE
NTDQVEQLAIDRAKKLFKADHANVQPHSGAQANEAVYYAWCEPGDTILAMDLAHGGHLTH
GAPVTRSAREYNFIRYGIKNIDTGEIDYEEIRQLALKHKPKIILAGFSAYPRELDYEKFA
EIGNEVGAMLMADMSHIAGLIVSGAAKNPFDYGFHVITTTTHKTLRGPRGGLILSRGIVG
NPLKKPEKTLENLPTLIDRAVFPGTQGGPHMHTIAAKAVAFGEALQPEFKDYAEQIVKNA
KRLAEELQKRGFKLVTGGTSNHLILADIHSSFGIDGKEAEIAMDKIGLTLNANAIPDDPL
PRFRPSGIRLGTPAVTTRGAKEDDMEKIAEWMRRSIDNRDNDDELTELRKEVVEFCHTLR
DI
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaaagacaagcaaattgaagaacttataaaagcagaaaaaaagcgtcaaacggacggc
ctggaactgattcctagcgagaattacgtttcatcagatgtgcttcaggcgctcggtagc
gttttcactaataaatattcagaaggctaccctggtcgacgctattacggcggacaagaa
aacactgatcaagtcgaacagttggcaattgaccgcgctaagaaactttttaaagccgat
cacgctaacgtccagccacattctggagcgcaggctaatgaggcagtctattacgcttgg
tgcgagcctggcgacactattctggctatggatttggctcacggcggacatcttacgcac
ggcgccccggtcacccgcagtgccagagagtataacttcattcgctatggtataaaaaat
atcgacactggcgaaattgactatgaagaaattcgtcaattagccttaaaacacaaacca
aagatcattttggcgggattttcggcatatccacgagagttagattatgaaaaatttgcc
gaaattggcaatgaagttggcgctatgctaatggcggatatgagccacattgcggggcta
atcgttagtggtgctgccaaaaacccgttcgattacggttttcacgtaattaccacaaca
actcataaaactctgcgtggaccacgaggcggactgattcttagtcgaggaatagttggt
aatccattgaaaaaaccagagaaaactctcgaaaatttacctacgttgattgatcgagcg
gtattccctggcacacaaggcggaccgcacatgcacaccatcgccgcaaaagccgtagcg
tttggcgaagctttacagccagaattcaaagattacgccgagcaaatcgttaaaaatgca
aaaagactggcggaagaattgcaaaagcgtggctttaagttagtaactggcggcaccagt
aaccatttgattctggcggatattcacagcagtttcggtattgatggcaaggaagcggaa
atcgccatggataaaattggtctgacgctgaatgctaatgcgattccagatgaccctctg
ccaagatttaggccaagcggcattcgcttaggcacgccagccgtcacgacgcgaggcgcc
aaagaagacgacatggaaaaaatcgcggaatggatgaggcggtcaatagacaatcgcgat
aatgacgatgagttgactgaactccgtaaagaagtcgtagaattctgccatactctacgc
gatatttaa

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