Nitrospirillum viridazoti: Y958_06980
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Entry
Y958_06980 CDS
T04935
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
nao
Nitrospirillum viridazoti
Pathway
nao03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nao00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Y958_06980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nao03021
]
Y958_06980
03400 DNA repair and recombination proteins [BR:
nao03400
]
Y958_06980
Enzymes [BR:
nao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Y958_06980
Transcription machinery [BR:
nao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Y958_06980
DNA repair and recombination proteins [BR:
nao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Y958_06980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ASG20577
UniProt:
A0A248JPD5
LinkDB
All DBs
Position
1:1509854..1510237
Genome browser
AA seq
127 aa
AA seq
DB search
MARVTVEDCVLKVPNRFELVMMAAQRARDVAAGAPLSVDRDNDKNPVVALREIADETVVL
DSLKNSLIKGHQRVQEQDEPEEEIIELMAGEQAWAVQGAAGEDDDLGAEDVAEDTAQGDD
LGDDEGL
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgttaccgttgaagattgcgtcctgaaggttccgaaccggttcgaactggtg
atgatggcggcccagcgggcgcgggacgtggcggccggcgcgccgctgtcggtcgatcgc
gacaatgacaaaaacccggtcgtcgccctgcgcgagatcgcggatgagacggtggtgctg
gacagcctgaagaactccctgatcaaggggcatcagcgcgtccaggagcaggacgagcct
gaggaagagatcatcgagctgatggccggtgagcaggcctgggccgtgcagggcgccgcc
ggtgaagatgacgatctgggcgctgaggatgtcgccgaggacacggcgcagggtgacgac
ctcggcgacgacgagggcctctga
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