Nitrospirillum viridazoti: Y958_12930
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Entry
Y958_12930 CDS
T04935
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
nao
Nitrospirillum viridazoti
Pathway
nao03030
DNA replication
nao03430
Mismatch repair
nao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Y958_12930
03430 Mismatch repair
Y958_12930
03440 Homologous recombination
Y958_12930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nao03032
]
Y958_12930
03400 DNA repair and recombination proteins [BR:
nao03400
]
Y958_12930
Enzymes [BR:
nao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Y958_12930
DNA replication proteins [BR:
nao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Y958_12930
DNA repair and recombination proteins [BR:
nao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Y958_12930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ASG21609
UniProt:
A0A248JSM4
LinkDB
All DBs
Position
1:complement(2797730..2798854)
Genome browser
AA seq
374 aa
AA seq
DB search
MKITIERAALLRSLGHVQSVVERRNTIPILSNVLLKAENGELALTATDMDLEIVESVPAD
IARPGSATAPAHTLYDIARKLPDGSQVELDFTADTLTLRSGRSQFRLGALPVEDFPVMAG
GDAGHRFTLSASDLKMLVDRTKFAISTEETRYYLNGIYLHASKAKTGAAEIPVLRAVATD
GHRLARVEMALPDGASGIPGVIIPRKTVIEVRKLLDEAADRIEVQLSDTKVRFAFDSIVL
TSKLIDGTFPDYERVIPTGNDKVMEVNAGQFAAAVDRVATISTEKSRAVKLSLDRGILTL
SASSPEAGSATEEIEVSYDNTALEIGFNSRYLLDITQQIEGDGVRFTLADAGSPTVVRDV
ADGSALYVLMPMRV
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaccatcgaacgcgcggctttgctccggtctctcggtcatgttcagagcgtg
gtggagcgtcggaacaccattccgatcctgtccaacgtcctgctgaaggcggaaaacggt
gagctggcgctgaccgccaccgacatggatctggagattgtggaatccgtgccggccgac
atcgcgcgtcccggttccgccacggcccccgcccacaccctgtacgacatcgcccgcaag
ctgccggatggcagccaggtggaactggacttcaccgccgacacgctgaccctgcggtcc
ggccggtcgcagttccgcctgggcgccctgccggtggaggacttccccgtcatggccggc
ggcgacgcgggccaccgtttcaccctgtcggccagcgacctgaagatgctggtggaccgc
accaagttcgccatctccaccgaggagacgcgctactacctcaacggcatctacctgcac
gcctccaaggccaagaccggtgccgccgaaatccccgtgctgcgcgccgtggccaccgac
ggccaccgcctggcccgggtggagatggccctgccggacggcgccagcggcattcccggc
gtcatcattccgcgcaagaccgtgatcgaggtgcgcaagctgctggacgaggcggcggac
cgcatcgaggtgcagctgtccgacaccaaggtgcgcttcgccttcgacagcatcgtgctg
accagcaagctgatcgacggcaccttcccggactatgagcgcgtcatccccacgggcaac
gacaaggtgatggaggtcaacgccggccagttcgccgccgccgtcgaccgcgttgccacc
atctccacggaaaagagccgggcggtgaagctcagcctggaccgcggcatcctgaccctg
tccgcctccagccccgaggcggggtccgccacggaggagatcgaggtcagctacgataac
accgcgctcgagatcggtttcaacagccgctacctgctggacatcacccagcagatcgag
ggcgatggcgtgcgcttcacgctggccgacgccggctcgcccaccgtggtgcgcgacgtg
gccgacggttcggccctctacgtcctcatgccgatgcgcgtttga
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