Nitrospirillum viridazoti: Y958_13315
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Entry
Y958_13315 CDS
T04935
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
nao
Nitrospirillum viridazoti
Brite
KEGG Orthology (KO) [BR:
nao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nao03016
]
Y958_13315
Enzymes [BR:
nao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Y958_13315
Transfer RNA biogenesis [BR:
nao03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Y958_13315
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ASG21670
UniProt:
A0A248JT38
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All DBs
Position
1:complement(2880607..2881173)
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AA seq
188 aa
AA seq
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MIRLFVGLEMPEAVRDALSRLTGGLPGARWVPPENYHLTLRFIGEVDEGVAQDIDEALDL
VVAPAFTLALDGLGQFGKGEKSRVLWAGLRPEPALDHLQAKVESAMVRAGLAAETRKFSP
HVTLATLGRETPAARVGRLMEQHGLFQAGPFPVDRFILYESVLGRQGSTYHALRGYPLGG
WRPVEEAP
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctgttcgtgggcctggaaatgccggaagcggtgcgggatgccctgtcccgc
cttaccggtggcctgccgggggcccgctgggtgccgccggaaaactatcacctgaccctg
cgcttcatcggcgaggtggatgagggcgtggcccaggacatcgatgaggccttggacctg
gtggtggcgcccgccttcaccctggcgctcgatgggctgggccagttcggcaagggggag
aagtcgcgcgtgctgtgggccggcttgcgccccgaaccggcgctggaccatctgcaggcc
aaggtggagagcgcgatggtgcgggctgggctggccgccgagacgcgcaagttcagcccg
cacgtcaccctggccaccctagggcgcgagacgccggcggcccgcgtcggccggctgatg
gagcaacacggcctgttccaggcggggccgttcccggtcgaccgcttcatcctttatgaa
agcgtgctgggccggcagggcagcacctaccatgcgctgcggggctatccgctgggcggc
tggcggccggtggaagaggccccctga
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