Nitrospirillum viridazoti: Y958_13380
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Entry
Y958_13380 CDS
T04935
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
nao
Nitrospirillum viridazoti
Brite
KEGG Orthology (KO) [BR:
nao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nao03400
]
Y958_13380 (addB)
Enzymes [BR:
nao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Y958_13380 (addB)
DNA repair and recombination proteins [BR:
nao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Y958_13380 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ASG21683
UniProt:
A0A248JSH6
LinkDB
All DBs
Position
1:2891410..2894442
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AA seq
1010 aa
AA seq
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MTWPAASGEETGTSLFTIAPGLPFVDALAAGILARVGDDPLALSRLTVLLPTVRAVRSLR
EAFLRLSGGKPILLPRLSPLGDVDTDEVVFTQGGTELPQAVPALRRQLLLARLVMRAPDL
AATPAQAVSLAGELARLLDEVQTEGCKFEDLARLVPDDYAQHWQVTLRFLEIITQHWPAL
LEDEGGVDPARERELRLKALAETWRTKPPPGPVIAAGSTGSIPATADLLAVVAALPQGAV
VLPGLDLDCDEATWQDLDEAHPQYGLKRLLERLEIRRGAVRPWPLPDPLPEIMAHRRSAP
ARARLVAEALRPAGTTEAWQDLSASALAAAADQALAGLSRLDAATPQEEAGAIALMMREV
LETPGRTAALVTPDRDLARRVALALKRWDIAVNDSAGLPLTQSAVGSYLRLLADWAAEPA
PLALLSLLKHPLAAGGQNPSFFRAQVRDLERAVLRGPRPADGFEGLRLALAQAEPRRFDS
HGDPDAHRARLSAFIDGLEEILRPLLAAMSGTGKTLAGWLDLHAHTAEALAASDTQSGAD
RLWRLDDGEAAAAFVDELQDAGHDFPELGGPDYAAVISALMVGRAVRPRYGLHPRLYILG
LLEARLQQFDVMILGGLNEGTWPPQPKADPWLSRPMRQRFGLPTPERHLGQTAHDFAQAC
GAATVVLTRSERVEGTPTVPSRWLLRLDTVLKALGRPRALSITMGRWTAWTEAMDTPAAV
RPCPPPEPRPPVAARPRRLSVTQVETWMRDPYALYARHVLRLEALDPLDADPGAADRGTM
IHEALDDFIKANPGTLLPEDAREQLLRFGRVAFAPYSGQPSLETFWWPRFERIADWFLAL
EQERRAGGVQPLATEAKGTLTLETAYKPFEIIAKADRIDRHPDGSVAIIDYKTGTPPRAK
DVELGFAPQLPLEAAIALSGGFGLRAPVVEQLAFWRLTGGEPAGQVVALKLDPARLAAEA
VEGLRQLIDLFDQESTPYRSQPRPGMAPRYSDYLHLARVAEWSVGDGGEA
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgacgtggcctgccgcatcaggggaggagaccggcacatccctgttcaccatcgcgccc
gggctgccgttcgtggacgcgctggcggccggcatcctggcgcgggtgggcgatgacccg
ctggccctgtcgcggctgaccgtcctactgcccacggtgcgcgccgtgcgctccctgcgg
gaggccttcctgcgcctgtcgggcggcaagcccatcctgctgccccgcctgtcgcccctg
ggcgacgtggacacggacgaggtggtgttcacccagggcggcaccgagctgccccaggcc
gtgcccgccctgcgccggcagctgctgctggcccgcctggtcatgcgcgcgcccgacctg
gccgccacccccgcccaggccgtgagcctggcgggcgagttggcgcgcctgctggatgaa
gtgcaaaccgagggctgcaaattcgaggatttggcccgcctggtgccggacgactacgcc
cagcactggcaggtgaccctgcgcttcctggaaatcatcacccagcattggccggccctg
ctggaagacgagggcggcgtggacccggccagggagcgcgaactgcggctgaaggccctg
gccgaaacctggcggaccaagccgccgcccggccccgtcatcgccgccggatccaccggc
agcatccctgccaccgctgacctgctggcggtggtcgcggccttgccccagggcgccgtc
gtcctgcccggcctggacctcgattgcgatgaggccacctggcaggatttggacgaggcc
cacccgcaatacggcctgaagcgcctgctggaacggctggagatccgccggggcgcggtg
cggccctggcccctgcccgacccgttgccggagatcatggcgcaccgccgcagcgccccc
gcccgggcccgcctggtggcggaggccctgcgtcccgccggcacgacggaggcctggcag
gacctgtccgccagcgccctggcggcggcggccgaccaggccctggccggcctgtcgcgc
ctagatgccgccaccccgcaggaggaggcgggcgccatcgccctgatgatgcgcgaggtg
ctggagacgccgggccgaacggcggccctggtgacgcccgaccgcgacctggcccggcgc
gtggccctggcgctgaagcgttgggacatcgccgtcaacgacagcgccggcctgccgctg
acgcaaagcgcggtgggcagctatctgcgcctgctggccgactgggcggcggagccggcc
cccctggcgctgctgtccctgctgaagcaccccctggcggcgggcgggcagaacccatcc
ttcttccgcgcccaagtgcgcgacctggaacgggcggtgctgcgtggcccgcgaccggca
gacggtttcgaaggtctgcgcctggccctggcccaggcggagccccggcgcttcgacagc
cacggcgacccggacgcccaccgcgcccgcctgtcggccttcatcgacgggctggaggaa
atcctgcggcccctgctggcggccatgagcggcacgggcaagaccctggccggctggctg
gacctgcatgcccatacggcggaggccctggccgccagcgacacgcaatcgggggccgat
cgcctgtggcgcctggatgatggcgaagccgccgccgccttcgtggacgaattgcaggac
gccggccacgatttccccgagctgggcgggccggactatgccgccgtcatcagcgccctg
atggtgggccgcgcggtgcgcccccgctatggcctgcacccgcgcctctacatcctgggc
ctgctggaggcgcggctacagcaattcgacgtcatgatcctgggtggcctgaacgagggc
acctggccgccgcaacccaaggccgacccctggctgtcgcgccccatgcgccagcgcttc
ggcctgcccacgccggagcggcatttgggccagacggcgcatgacttcgcccaggcctgc
ggcgccgccaccgtggtgctgacccggtcggaacgggtggagggcacgcccaccgtgccg
tcgcgctggctgctgcggctggacacggtgctgaaggcgctgggccgtccccgcgcttta
agcatcaccatgggccgttggaccgcctggacggaggcaatggacacgccggcggcggtg
cggccctgccccccgccggaaccgcgcccgcccgtggccgcccggccgcgccgcctgtcg
gtcacccaggtggagacctggatgcgcgacccctacgccctctacgcccgccacgtcctg
cgcctggaggcgctggatcccctggacgccgacccgggggcggccgaccgcggcactatg
atccatgaggcgctggacgacttcatcaaggccaaccccggcaccctgctgcccgaggac
gcgcgcgagcagctgctgcgcttcggccgcgtggcctttgccccctatagcggccaaccc
agcctggagaccttctggtggcccaggttcgagcgcatcgccgactggttcctggcgctg
gagcaggagcggcgggccggcggcgtccagcccctggcgaccgaggccaagggcaccctg
accctggagacggcgtacaagccgttcgagatcatcgccaaggccgaccgcatcgaccgc
caccccgacgggtccgtcgccatcatcgactacaagaccggcaccccgccccgggccaag
gacgtggagctgggcttcgccccgcagctgccgctggaggccgccatcgccctgtccggc
ggtttcggcctgcgggcaccggtggtggagcagctggccttctggcgcctgacggggggt
gagcccgccggccaagtggtggccctgaaactggaccccgcccgcctggcggcggaggcg
gtggagggcttgcgccagctgatcgacctgttcgaccaggaatccaccccctaccgctcc
cagccccggcccggcatggcgccgcgctattccgactatctgcacctggcgcgcgtggcc
gagtggtcggtgggcgacgggggggaagcatga
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