Nitrospirillum viridazoti: Y958_13385
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Entry
Y958_13385 CDS
T04935
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
nao
Nitrospirillum viridazoti
Brite
KEGG Orthology (KO) [BR:
nao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nao03400
]
Y958_13385 (addA)
Enzymes [BR:
nao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Y958_13385 (addA)
DNA repair and recombination proteins [BR:
nao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Y958_13385 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
ASG21684
UniProt:
A0A248JTY9
LinkDB
All DBs
Position
1:2894439..2897966
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AA seq
1175 aa
AA seq
DB search
MSEARPQDRPIDPTVKQRQASDPETSVWVGASAGTGKTKVLTDRVVRLMLAGTEPGRILC
LTFTKAAAAEMANRIAERLASWVVMADGDLTQALADLNGRPPTRDEVLTARRLFARVLDT
AGGMKIQTIHAFCQSLLRRFPLEARLPPNFQVMDDRTAAEALAEAQAHMLASAQDRPDTP
LGRALKRLAGALNEESFAELLADLVAQRGRIRRILDAHGGLDGTVAALFRHLGVGPEETE
AGVLAAGCRDEVLDVTGLRGACAALAEGTATDVERGLGIQRWLDQIDRRLTDIAAYRQLF
LTADGTVRSRLATKGALAANPRTADILAQEGQRLVALQERLRAVTVAHSTASLLTLAGSM
LEGYQRWKDSRAQLDFDDLILAASALLTGDAQACAWVLYKLDGGLDHILIDEAQDTNPEQ
WRVVSALAEEFFAGEGQSQARRTLFVVGDEKQSIFSFQGADPAEFARMRRTFQARVQQAE
RPWAIVDLETSFRSVGAVLQAVDTVFAQQEARDGVSAQAIRHRPFRQGMAGTVELWPLVR
PGDGADTPAWSPPLHHEPEDRPQARLATVIADQIAHWIARGEVLEARGRPLTAGDILVLV
RRRNAFVQQLVRALKERRVPVAGVDRMVLTEQLAVMDLMAVGQFLLMPEDDLTLATVLKS
PFIGLDEEALFTLAHGRGGRLWPALVKRAETDMRFQPAYAWLRRLLGEVDYTAPYELFAG
LLTRPCPADPVSGRRALLGRLGAEAIDPVDEFLSLCLGFDRAHPPSLQTFLHWLAAGKTE
VKRELDTGAKDRGPEGGQVRIMTVHGSKGLQAPVVILPDTTRKPVTSPRILWPHGDEEGG
DDDGGSAPGVPLYAPRREQEDVKARAARAAADRRRDQEYRRLLYVALTRAEDRLHVCGYE
GKTATSDDTWFRLTERALAAVAPSRAFDLTAVSRQGWVGDGRVLSEPQTRPPPTQRAGRD
GAEAVPPAPAWLLAPPAAEPAPSRPLAPSRPDGEEPAVRSPLGDGEAKEARRFKRGTLIH
KLLQLLPEMPVAARAGAARRWLDRPAHGLDEAAREEIWSETLRVLNHDQFADLFGPDSRS
EVPLVGTVGTRPLAAQIDRLVVTATEVKIVDFKTNRPPPRTAEEIPGLYVSQMAAYRDAL
RRIYPDLAIRCLLLWTDGPFITEVDPARMDAVILG
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcgcgcccccaggatcgcccgatcgaccccacggtcaagcagcgccaggcc
tcggaccccgaaacctcggtctgggtgggggcgtcggcgggtaccggcaagaccaaggtg
ctgaccgaccgggtggtgcggttgatgctggccggcaccgagcccggccgcatcctgtgc
ctgacctttaccaaggcggccgcggcggaaatggccaaccgcattgcagaacgccttgca
agttgggtggtcatggcggacggcgacctgacgcaggccctggccgacctgaacggccgc
ccgcccacgcgggatgaggtactgaccgcccgccgcctgttcgcccgcgtgctggacacg
gccggtggcatgaagatccagaccatccatgccttctgccagtccctgctgcgccgtttc
ccgctggaggcgcggctgccacccaatttccaggtgatggacgaccgcacggcggcggaa
gcgctggccgaggcacaggcccacatgctggcgtccgcccaggaccgaccggacaccccc
ctgggccgggccctgaagcgcctggccggcgccctgaacgaggaaagtttcgccgagctg
ctggccgacctggtggcccaaaggggccgcatccgccgcatcctggatgcgcacggcggc
ctggacggcaccgtcgccgccctgttccgccacctgggcgtggggccggaggagacggag
gccggcgtgctggcggccggctgccgggacgaggtgctggacgtcactggcctgcggggg
gcctgcgccgccttggccgagggcacggccacggatgtggaacgcggcctgggcatccag
cggtggctggaccagatcgaccgccgcctgaccgatatcgcggcctatcgccagctgttc
ctgacggcggacggtacggtacgctcccgcctggccaccaagggcgccttggccgccaat
ccgcgcaccgccgacattctggcccaggaaggccagcgcctggtggcattgcaggagcgc
ctgcgcgccgtgacggtcgcccattccaccgccagcctgctgaccctggccggcagcatg
ctggaaggctatcagcgctggaaggacagccgggcgcaactggacttcgatgacttgatc
ctggcggccagcgccctgttgaccggcgacgcccaggcctgcgcctgggtgctgtacaag
ctggacggcggcctggatcacatcctgatcgacgaggcgcaggacaccaacccggagcaa
tggcgggtggtgagcgccctggcggaggagttcttcgccggcgaaggccagtcgcaggcc
cggcgcaccctgttcgtagtgggtgacgagaagcagtccatcttcagcttccagggtgcc
gacccggcggagttcgcccgcatgcgccgcaccttccaggcgcgggtgcagcaggcggaa
cgtccctgggccatcgtcgacctggaaaccagcttccggtccgtcggcgccgtgctgcag
gcggtggatacggtgttcgcgcagcaggaggcccgggacggcgtgtcggcgcaggccatc
cgccaccgccccttccgccagggcatggcgggcacggtggagctgtggcccctggtgcgg
cccggcgatggggcggacacgccggcctggtccccgcccctgcaccatgagccggaagac
aggccccaggcccgcctggccaccgtcatcgccgaccagatcgcccattggatcgccagg
ggggaggtgctggaggcgcgcggccgccccctgaccgccggcgacatcctggtgctggtc
cgccgccgcaacgccttcgtccagcagctggtgcgcgcgctgaaggaacggcgcgtgccg
gtggcgggcgtggaccgcatggtgctgaccgagcagctggccgtcatggacctgatggcg
gtgggccagttcctgctgatgccggaagacgacctgaccctggccaccgtgctgaaaagc
cccttcatcggcctggatgaggaagcgctgttcaccctggcgcacgggcgcggcggccgc
ctgtggccggccctggtgaagcgggcggaaacggacatgcgcttccagcccgcctacgcc
tggctgcgccgcctgctgggcgaggtcgactacaccgccccctatgagctgttcgcgggc
ctgctgacccggccctgcccggccgacccggtcagcggccggcgggccctgctgggccgc
ctgggggcggaggccatcgacccggtggatgagttcctgagcctgtgcctgggtttcgac
cgcgcccatccgccgtccctgcaaaccttcctgcactggctggccgccggaaagacggaa
gtgaagcgcgagctggacacgggcgccaaggatcgcgggccggagggcgggcaggtgcgc
atcatgaccgtccacggttccaaaggcctgcaggcgccggtggtcatcctgcccgatacg
acgcgcaagccggtgaccagcccccgcatcctgtggccccacggagacgaagagggcggc
gatgacgatggcggctccgcccccggcgtccccctatatgccccccggcgggagcaggag
gacgtgaaggcccgggccgcccgcgccgccgccgaccgccggcgcgaccaggaataccgc
cgcctgctgtacgtggccctgacccgggcggaggaccgactgcatgtctgcggctatgag
ggcaagacggccaccagcgacgacacctggttccgcctgacggaacgggcgctggccgcc
gtggcgcccagccgggccttcgacctgaccgccgtgtcgcgccagggatgggtgggcgac
ggccgggtgctgtcggagccgcagacccggcccccgcccacccaacgcgcggggcgcgac
ggtgccgaggcggtcccccccgcccccgcctggctgctggccccaccggcggccgagccc
gccccgtcgcgcccgctggccccctcccgcccggatggggaggaaccggcggtgcggtcg
cccctgggcgacggcgaggcgaaagaagcccgccgcttcaagcgcggcaccttgatccac
aagctgctgcagctgttgccggaaatgccggtggcggcccgggccggggccgcccgccgc
tggctggaccgcccggcccatggcctggacgaagccgcacgagaggaaatctggtcggaa
accctgcgcgtgctgaatcacgatcagtttgccgacctgttcggtcccgacagccggtcg
gaagtgcccctggtgggcacggtgggcacgcgccccctggcggcgcagatcgaccggctg
gtggtgacggcgaccgaggtcaagatcgtcgatttcaagaccaaccgcccgccgccccgc
acagcggaggagattcccggcctgtacgtctcgcagatggcggcctaccgggacgccctg
aggcgcatctatccggatctggccatccgctgcctgctgctgtggaccgacggccccttc
atcaccgaggtcgatcccgcccgcatggacgccgtcattttaggctga
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