Nitrospirillum viridazoti: Y958_13525
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Entry
Y958_13525 CDS
T04935
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nao
Nitrospirillum viridazoti
Pathway
nao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Y958_13525 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nao03019
]
Y958_13525 (pnp)
03016 Transfer RNA biogenesis [BR:
nao03016
]
Y958_13525 (pnp)
Enzymes [BR:
nao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Y958_13525 (pnp)
Messenger RNA biogenesis [BR:
nao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Y958_13525 (pnp)
Transfer RNA biogenesis [BR:
nao03016
]
Prokaryotic type
tRNA degradation factors
Y958_13525 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
KH_2
OB_RRP5_4th
Phage_SPbeta_YopN
Motif
Other DBs
NCBI-ProteinID:
ASG21706
UniProt:
A0A248JT63
LinkDB
All DBs
Position
1:complement(2927873..2930002)
Genome browser
AA seq
709 aa
AA seq
DB search
MFKVFRKEMEWGGRKLVLETGKVARQADGAVIATYGDTVVLCTAVGAKSVKPGQDFFPLT
VNYQEKAFAAGKIPGGFFKREGRPTEKEVLTSRLIDRPIRPLFVDGFRNEVQVVCTVLSH
DLENDPDIVAMIGASAALTLSGLPFLGPIGGARVGYKDGEFILNPTLEQVETTDLDLVVA
GTQEGVLMVESEAKELSEEIMLKAVMFGHTAFQSVINLIIDLAEQAAKDPWDLPPPAYDK
AALKAKLNELVGADIRAAYTLTVKQERYEAISTAKKKAVEALTADAAHTAEAVGSTFKDL
EADVLRGTVLETGKRIDGRTTVDIRPIVAEVGVLPRAHGSSLFTRGETQALVVATLGTAQ
DEQIVDALEGEYRENFMLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAVHPLLPAKEA
FPYTLRLVSEITESNGSSSMATVCGTSLALMDAGVPLPRPVAGIAMGLIKEDTGVAVLSD
ILGDEDHLGDMDFKVAGTEAGVTALQMDIKITSITEDIMKVALAQAKDGRLHILGEMAKA
IGGARDAVNQNAPRITVINIPKEKIRDVIGSGGKVIREIVEQTGAKIDIEDDGTVKVAAV
DSKASDAAIKWIKGIVAEPELGEIYVGKVVKVMDFGAFVNFLGARDGLVHISELSPQRVA
KVTDVVNQGDEVKVKVLGFDDRGKVKLSMKVVDQATGEDLSKKDKAEEA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggttttccgtaaagagatggaatggggcggccgcaagctggtcctcgagacg
ggcaaggtcgcccgccaggccgatggcgctgtcatcgccacctacggcgacacggtcgtg
ctctgcaccgccgtcggcgccaagtccgtgaagcccggccaggactttttccccctgacc
gtcaactaccaggaaaaggcgttcgccgccggcaagatcccgggcggcttcttcaagcgc
gagggccgtccgaccgagaaggaggtgctgacctcccgcctcatcgaccgcccgatccgc
ccgctgttcgtcgacggcttccgcaacgaggtgcaggtcgtctgcaccgtgctgagccat
gacctggaaaacgatcccgacatcgtcgcgatgatcggcgcctccgccgcgctgacgctg
tccggcctgcccttcctgggccccatcggcggcgcccgcgtcggctacaaggatggcgag
ttcatcctgaacccgacgctggagcaggtcgagaccaccgacctggacctggtggtcgcc
ggcacgcaggaaggcgtgctgatggtcgaatcggaagccaaggagctgtccgaagagatc
atgctgaaggccgtcatgttcggccacaccgccttccagtcggtgatcaacctgatcatc
gacctggccgagcaggccgccaaggacccgtgggatctgccgccgccggcctatgacaag
gccgcgctgaaggccaagctgaacgagctggtgggcgccgacatccgcgccgcctacacc
ctgaccgtgaagcaggaacgctatgaggccatctccaccgccaagaagaaggcggtcgag
gccctgacggcggacgcggcccacacggcggaagccgtgggcagcaccttcaaggatctg
gaggccgacgtgctgcgcggcacggtcctggagaccggcaagcgcattgacggccgcacc
accgtcgacatccgccccatcgtggcggaagtgggcgtgctgccccgggcccacggttcg
tccctgttcacccggggtgagacccaggccctggtggtcgccaccctgggcaccgcccag
gacgagcagatcgtggacgcgctggaaggcgaataccgcgaaaacttcatgctgcactac
aacttccccccgtactccgtgggtgaagccggccgcatgggcagcccgggccgtcgcgag
atcggccacggcaagctggcctggcgcgccgtgcatcccctgctgccggcgaaggaagcc
ttcccctacaccctgcgtctggtttccgagatcaccgagtccaacggctcgtcctccatg
gccaccgtctgcggcacctcgctggcgctgatggatgccggcgtgccgctgccgcgcccc
gtggccggcatcgccatgggcttgatcaaggaagacaccggcgtcgccgtgctgtccgac
atcctgggtgacgaggatcacctgggcgacatggacttcaaggtggccggcaccgaggcg
ggcgtgaccgccctgcagatggacatcaagatcacctcgatcaccgaggacatcatgaag
gtcgccctggcgcaggccaaggacggccgtctgcacatcctgggcgagatggccaaggcc
atcggcggcgcccgtgacgccgtgaaccagaacgccccgcgcatcaccgtgatcaacatc
ccgaaggagaagatccgcgacgtgatcggctccggcggcaaggtgatccgtgagatcgtg
gagcagaccggcgccaagatcgacatcgaggacgacggcaccgtgaaggtggcggccgtg
gacagcaaggcgtccgacgccgccatcaagtggatcaagggcatcgtcgccgagcccgag
ctgggcgagatctacgtcggcaaggtcgtgaaggtcatggacttcggcgccttcgtgaac
ttcctgggcgcccgcgacggcttggtccacatctccgaactgtcgccgcagcgcgtggcc
aaggtgaccgacgtggtcaaccagggcgacgaggtgaaggtgaaggtcctgggcttcgac
gatcgcggcaaggtgaagctgtcgatgaaggtcgtcgaccaggccaccggcgaggacctg
agcaagaaggacaaggccgaggaggcgtaa
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integrated database retrieval system
