Nitrospirillum viridazoti: Y958_13535
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Entry
Y958_13535 CDS
T04935
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nao
Nitrospirillum viridazoti
Brite
KEGG Orthology (KO) [BR:
nao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nao03016
]
Y958_13535
Enzymes [BR:
nao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Y958_13535
Transfer RNA biogenesis [BR:
nao03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Y958_13535
Prokaryotic type
Y958_13535
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ASG21708
UniProt:
A0A248JUC5
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All DBs
Position
1:complement(2930582..2931523)
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AA seq
313 aa
AA seq
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MARKRKGRPLHGWLVLDKPPGMTSTQAMAKVRWLMQAEKAGHAGTLDPIATGILPIAFGE
ATKTVSYAMDCGKTYRFTLRFGESRTTDDLAGEVTAIHHHRPSDEAIEAALENFQGEISQ
VPPQFSAIKVAGERAYDLAREGERVDLAPRIVRVDSFLLTGRPDADHAEFEVECGKGTYM
RSLARDLALALGTVGHVSVLRRLRVGRFTMDQAISLDELERVAQTPTVEGLLQPIETALD
DIPALALAEAEAHRLRHGQTVALLRRHDLERLEAIHDQLAGGEPIALAISGGKPVALVHV
EGAEVRPVRVLNL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtaagcgcaagggccggccactgcacggctggctggtgctggacaagccgccg
ggcatgaccagcacccaggccatggccaaggtgcgctggctgatgcaggcggaaaaggcg
ggccacgccggcacgctggaccccatcgccaccggcatcctgcccattgccttcggcgag
gccaccaagaccgtgtcctacgccatggactgtggcaagacctaccgcttcaccctgcgc
ttcggtgagtcccgcaccaccgacgatttggcgggggaggtgacggccatccatcaccac
cgccccagcgacgaggccatcgaggcggcactggagaatttccagggcgagatcagccag
gtgccgccgcagttctccgccatcaaggtggcgggcgagcgcgcctatgatctggcgcgc
gagggtgaacgggtggatttggcgccgcgcatcgtgcgcgtggacagcttcctgctgacc
ggccgcccggacgccgaccacgccgagttcgaggtggagtgcggcaagggtacctatatg
cgctcgctggcgcgcgacctggccctggccttgggcacggtggggcacgtgtccgtcctg
cggcgtttgcgggtcgggcgcttcaccatggatcaggcgatttcgcttgacgaattggaa
cgggtggcgcagacacccacggtcgaaggacttctgcaaccgatcgagaccgcgctggac
gacatcccggcgctggccctggcggaagcggaagcgcaccgactgagacacggacaaacg
gtggcgctgctgcgccgtcatgatctggaacggctggaagccattcacgatcagttggcg
ggcggggagcccatcgcgcttgccatttcaggtggcaagccggtggcgttggtccatgtc
gagggggcggaggtccgtccggtgcgcgttttgaacctctaa
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