KEGG   Nitrospirillum viridazoti: Y958_16015
Entry
Y958_16015        CDS       T04935                                 
Symbol
gspD
Name
(GenBank) type II secretion system protein GspD
  KO
K02453  general secretion pathway protein D
Organism
nao  Nitrospirillum viridazoti
Pathway
nao03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:nao00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Y958_16015 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nao02044]
    Y958_16015 (gspD)
Secretion system [BR:nao02044]
 Type II secretion system
  General secretion pathway protein
   Y958_16015 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: ASG22448
UniProt: A0A248JWF3
LinkDB
Position
2:585553..587859
AA seq 768 aa
MNPAHPSAPPRLLLAACLALFGCTESAVTRGPGTPLPSSPPAATAPVSSVIGPNAPPPRV
PAQTVTGTGQLVRQTRPVSGVTPAGADAGEPVEMNFVNADVRSVLDAVLGGMLGLNYTID
PKVQGQVTIRTTRPLARGQALAAVDAALRTQGFAIIGGDGFYQVVPAADAAGQAPVQTTS
AAERTAGFSTAIVPIRHVSVAELDKIVHPLTRQGFIQLADAGRNIFIVNGTAHEIESFTQ
LVASFDVDWLAGLSFSLHTLQSVEPARLEAELRRVLQLDGGPLQGMIDFVPINRLNALLV
VAKRPELLPTVGTWIDRLDRPGPDGGKVVHFYEVQNGSAVELANALNRLVGRAGAEQQQG
TEQQGRGRAGGRSTTTTTAMTASRGGLSTGAGSSPPSGSAATGASGSAASAPPSPVASGA
TLPSAAGGGGEEEDGLSELKGVRVVADERRNALLIFGSGAQYALLEQVLTRLDAPREQVL
IEATIAEVTLNDQLNFGVQWFLDRGSSTAGFSNTNGATVGASYPNFNYTFLTPNTRVVLN
ALSSVTDVQVLSAPRLMVLNNETARLQVGDQVPVVVQSATSTLTSDSAVVNSVEYHDTGV
ILEVTPRINRSGAVVLDVNQEVSTVTNTTTSGIDSPTIQQRKITSVVNVQDGETVALGGL
ISDTSSRNGAGIPYLRDIPVLGKLFGTDGHTKGRTELLVFLRPVIVRDATRAREVTDALR
ASMSRLEIFAGATGGTPVPSPAVVPPPVQTMPLPATPPSYEPAAPTGR
NT seq 2307 nt   +upstreamnt  +downstreamnt
atgaacccagcccaccccagtgctccgccccgcctgctgctcgccgcgtgcctggccttg
ttcggctgtacggaaagcgccgtgacccgcgggccgggcacgcccttgccgtcctcgcca
cccgccgccaccgcgccggtcagcagcgtcatcggccccaatgccccgccgccgcgcgtg
ccggcgcagaccgtgaccggtaccgggcagctggtgcggcagacccggccggtttcgggc
gtgaccccggccggtgcggacgcgggtgagccggtggagatgaacttcgtcaacgccgat
gtccgttccgtgctcgacgccgtcctgggcggcatgctgggcctgaattacaccatcgat
cccaaggtgcagggccaggtgaccatccgtaccacccggccgctggcaagggggcaggcg
ctggcggcggtggacgcggccctgcgcacccagggcttcgccatcatcggcggcgatggc
ttctatcaggtggtgccggcggccgacgccgccggccaggcgccggtgcagaccacctcg
gcggcggagcgcacggcgggcttcagcaccgccatcgtgcccatccggcatgtctcggtg
gcggaactggacaagatcgtccatcccctgacccgccagggcttcatccagctggcggac
gccggccgcaacatcttcatcgtcaacggcacggcgcatgagatcgagtccttcacccaa
ctggtcgccagcttcgatgtcgactggctggccggcctgtccttctccctccacaccctg
cagtcggtggagccggctcggctggaggcggagttgcgccgtgtgctgcaactggacggg
ggacccttgcagggcatgatcgacttcgtgcccatcaaccggctgaacgccctgctggtg
gtggccaagcggccggagttgctgcccaccgtgggcacctggatcgaccggctggaccga
cccggccccgacggtggcaaggtggtgcacttctatgaggtgcagaacgggtccgccgtg
gagcttgccaacgccctgaaccggctggtgggccgtgccggtgctgagcagcagcagggg
acggagcagcagggccggggccgcgccggcggccggtccacaacgacgaccacggcgatg
accgccagccgaggggggctgtccaccggcgccggcagcagcccgcccagcggcagcgcc
gccaccggcgcctccggttccgccgccagcgcgccgcccagccccgtggccagcggggcc
accctgcccagcgccgcgggcgggggcggagaggaggaggatgggctatcggaactgaag
ggcgtgcgcgtcgtggcggatgagcggcgcaacgccctgctgatcttcggctcaggcgcg
cagtacgccctgctggaacaggtgctgacccgcctggacgcaccgcgcgagcaggtgctg
atcgaggcgacgatcgccgaggtgacgctgaacgaccagctgaacttcggtgtccagtgg
ttcctggaccggggcagcagcacggcgggcttttccaacaccaacggcgccaccgtgggg
gccagctaccccaacttcaactacaccttcctgacccccaatacccgggtggtactgaac
gccctgtccagcgtcaccgacgtgcaggtgttgtcggcgccccgcctgatggtgctgaac
aacgagacggcgcgcctgcaggtgggtgaccaggtgccggtggtggtgcagtcggccacc
agcacgctgaccagtgacagcgccgtggtgaactccgtcgaatatcacgacaccggcgtg
atcctggaagtgacgccccgcatcaaccgcagtggcgccgtggtgctggacgtgaaccag
gaggtcagcaccgtgaccaacaccaccacgtccggcatcgacagccccaccatccagcag
cgcaagatcaccagcgtggtgaacgtgcaggatggggagacggtggccctgggcggcctg
atcagcgacacctccagccgcaacggcgccggcatcccctacctgcgcgacatcccggtg
ctgggcaagctgttcggcaccgacggccataccaagggccggaccgagctgctggtcttc
ctgcgcccggtcatcgtgcgcgacgccacccgggcgcgcgaggtgacggacgccctgcgc
gccagcatgagccgcctggaaatcttcgccggcgccactggcggcacgccggtaccgtcg
ccggccgtggtgccgcccccggtacagaccatgcctttgccggccacgccgccgtcctat
gagccggccgcgcccacgggtcgatga

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