Nitrospirillum amazonense: Y958_22525
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Entry
Y958_22525 CDS
T04935
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
nao
Nitrospirillum amazonense
Pathway
nao00630
Glyoxylate and dicarboxylate metabolism
nao00680
Methane metabolism
nao01100
Metabolic pathways
nao01120
Microbial metabolism in diverse environments
nao01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
nao00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Y958_22525
09102 Energy metabolism
00680 Methane metabolism
Y958_22525
Enzymes [BR:
nao01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Y958_22525
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_10
Fer4_9
Fer4_8
Fer4_21
Fer4_2
Fer4_6
Fer4_17
Fer4_16
Fer4_15
Fer4_4
Fer4_13
Fer4_22
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
ASG23755
UniProt:
A0A248JYG2
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Position
3:107854..110715
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AA seq
953 aa
AA seq
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MGLVPEIDYGTPHPRGLKGDTDAKMVTLTIDGETVTVAEGTSIMRAAMDSGVTIPKLCAT
DTLDAFGSCRLCLVEIQGRAGTPASCTTPVAPGMVVSTQTERLKRLRKGVMELYISDHPL
DCLTCAANGDCELQDMAGAVGLREVRYGMEGANHLGQAKDTSNPYFTFDPSKCIVCSRCV
RACQEVQGTFALTIQDRGFASKVSAGMDEDFMDSECVSCGACVQACPTATLMEKSVIEIG
QPEHSVVTTCAYCGVGCSFKAEMRGTELVRMVPYKDGAANRGHSCVKGRFAWGYATHRER
ILKPMIRSKITDPWREVSWEEAINYTASEFKRIQDKYGRASVGGITSSRCTNEETYLVQK
LVRAGFGNNNVDTCARVCHSPTGYGLGTAYGTSAGTQDFDSVEDTDVVMVIGANPTDGHP
VFGSRLKKRLRQGAKLIVVDPRRIDLVKTPHVEAAHHLPLRPGTNVAVVTAIAHVIVTEG
LVNEAFVRERCDWDEFQDWAAFVAEERHSPEAIAEYTGVPAAELRAAARLYATGGNAAIY
YGLGVTEHSQGSTTVMAIANLAMATGNLGRRGVGVNPLRGQNNVQGSCDMGSFPHELPGY
RHVHDDATRAIFEDMWGVTLEREPGLRIPNMLDAAVDGTFKGLYVQGEDIVQSDPDTHHV
TAGLEAMECVVVQDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRINRVRRVMPPRNGY
ADWEITQILSNALGYPMTYSHPAEIMAEIAATTPGFRNVTYEMLDERGSVQWPCNDDAPE
GTPIMHINGFARGKGKFVLTEYIPTDERTGARFPLLLTTGRILSQYNVGAQTRRTANSEW
HKEDRLEIHPHDAENRGVRDGDWVKLQSRAGETTLRALITDRVSPGVVYTTFHHPMTQAN
VITTDYSDWATNCPEYKVTAVQVSPSNGPSDWQEKYKTHSDLSRRIVGTDAAE
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgggcttggttcctgagatcgactacggcaccccgcatccccgcggcctgaagggcgac
accgacgccaagatggtcaccctgaccatcgacggcgagacggtgacggtggcggagggc
acctccatcatgcgcgccgccatggacagcggcgtcaccattcccaagctgtgcgccacc
gacacgctggacgccttcggctcctgccggctgtgcctggtggaaatccagggtcgggcg
ggcacgcccgcctcctgcaccacgccggtggccccgggcatggtggtatccacgcagacg
gaacggctgaagcgcctgcgcaagggggtgatggagctgtacatctccgaccacccgctg
gattgcctgacctgtgccgccaatggcgactgcgagctgcaggacatggccggcgccgtg
ggtctgcgcgaggtgcgttatggcatggagggggctaaccacctgggccaagccaaggac
acctccaacccctatttcaccttcgacccgtcgaagtgcatcgtctgctcccgctgcgtg
cgggcctgccaggaggtacagggcaccttcgcactgaccatccaggaccggggcttcgcc
agcaaggtctcggccggcatggacgaggatttcatggacagcgagtgcgtcagctgcggc
gcctgcgtccaggcctgtcccacggccaccctgatggaaaagtcggtcatcgagatcggc
cagccggagcattccgtcgtcaccacctgcgcctattgcggcgtgggctgcagcttcaag
gcggagatgcgcgggactgagctggtgcgcatggtcccctacaaggacggcgccgccaac
cgcggccattcctgcgtgaagggccgcttcgcgtggggttacgccacccaccgcgagcgc
atcctgaagcccatgatccggtccaagatcaccgacccgtggcgcgaggtgtcgtgggaa
gaggccatcaactacaccgcgtcggaattcaagcgcatccaggataaatacggccgcgcc
tcggtcggcggcatcacctcctcccgctgcaccaatgaggagacgtatctggtgcagaag
ctggtgcgcgccggcttcggcaacaacaacgtcgacacctgcgcccgcgtctgccactcc
cccaccggctacggcctgggcacggcctacggcacctccgccggcacccaggacttcgac
agtgtcgaggataccgacgtcgtcatggtcatcggggccaaccccaccgatggccacccg
gtgttcggttcccgcctgaagaagcggctgcgccaaggcgccaagctgatcgttgtcgat
ccgcgccgcatcgacctggtgaagaccccacacgtggaggcggcccaccatctgccgctg
cgtcccggcaccaacgtcgccgtggtcactgccatcgcccatgtcatcgtcaccgagggc
ctggtgaatgaggccttcgtgcgcgagcgctgcgactgggacgagttccaggactgggcg
gccttcgtcgccgaggagcggcacagccccgaggccatcgccgagtataccggcgtgccg
gcggccgagctgcgcgccgccgcccgcctctacgccaccggcggcaacgccgccatctac
tatggtctgggggtgacggagcacagccagggctccaccaccgtcatggccatcgccaac
ctggccatggccacgggcaatctgggccggcgcggcgtgggcgtgaacccgctgcgcggc
cagaacaacgtccagggcagctgcgacatgggctccttcccccatgagctgccgggctac
cgccatgtccacgacgacgccacccgcgccattttcgaggacatgtggggcgtgaccctg
gaaagggagccgggcctgcgcattcccaacatgctggacgcggccgtcgacggcaccttc
aagggcctgtacgtccagggtgaggacatcgtgcagtccgatcccgacacccatcacgtc
accgctggcctggaggccatggagtgcgtggtggtgcaggacctgttcctgaatgagacg
gcgaactacgcccatgtcttcctgcccggctccaccttcctggagaaggatggcaccttc
accaacgcggaacggcgcatcaaccgcgtgcgccgggtcatgccgccgcgcaacggctac
gccgactgggaaatcacccagatcctgtccaacgccctgggctatcccatgacttacagc
cacccggcggagatcatggcggagatcgcggccaccaccccgggcttccgcaacgtgacc
tacgagatgctggacgaacgcggctccgtccagtggccgtgcaacgacgacgcgcccgaa
ggcacgcccatcatgcacatcaacggcttcgcccgcggcaagggcaagttcgtgctgacg
gaatacattcccacggatgaacgcacgggcgcccgcttccccctgctgctgaccaccggc
cgtatcctcagccagtacaatgtcggcgcgcagacccggcgtacggccaacagcgaatgg
cataaggaggacaggctggagatccacccgcacgacgcggagaaccgtggcgtgcgcgac
ggcgactgggtaaagctgcaaagccgcgcgggtgaaaccacgctgcgcgccctgatcacc
gaccgggtgtcgcccggcgtggtctacaccaccttccaccaccccatgacccaggccaac
gtgatcaccaccgactattccgactgggccaccaactgccccgaatacaaggtgacggcg
gtgcaggtcagccccagcaacggcccgtccgactggcaggagaagtacaagacccacagc
gacctcagccgccgcatcgttggcacggatgccgctgaatga
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