KEGG   Nitrospirillum viridazoti: Y958_22875
Entry
Y958_22875        CDS       T04935                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
nao  Nitrospirillum viridazoti
Pathway
nao00521  Streptomycin biosynthesis
nao00523  Polyketide sugar unit biosynthesis
nao00525  Acarbose and validamycin biosynthesis
nao00541  Biosynthesis of various nucleotide sugars
nao01100  Metabolic pathways
nao01110  Biosynthesis of secondary metabolites
nao01250  Biosynthesis of nucleotide sugars
Module
nao_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:nao00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    Y958_22875 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    Y958_22875 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    Y958_22875 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    Y958_22875 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    Y958_22875 (rfbB)
Enzymes [BR:nao01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     Y958_22875 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 3Beta_HSD NAD_binding_4 adh_short KR Sacchrp_dh_NADP Ldh_1_N DapB_N
Other DBs
NCBI-ProteinID: ASG23814
UniProt: A0A248K056
LinkDB
Position
3:189212..190282
AA seq 356 aa
MKIMVTGAAGFIGSAVCRLLASEGQDELVCVDKLTYAASLEAIGEVLAGGRAVLEKADVA
DVEAMRDIFRRHQPDAVMHLAAESHVDRSIEGSGIFIRTNINGTHVMLETAREYWQALPE
ERKAAFRFHHISTDEVYGSLGEDGLFREDTAYSPNSPYSASKAASDHLVNAWYHTYGLPT
LLSNCSNNYGPFHFPEKLIPLMILNGMEGKKLPVYGKGDNVRDWLFVEDHARALVLIVRK
GVPGERYNVGGNAEQRNLYVVETICDLLDERLPSATKRRDLITFVTDRPGHDQRYAIDAS
KIRRELGWEPSVTFEEGIRRTVDWYLANRWWWEPIREAKYSGQRLGVTAPAAAAVG
NT seq 1071 nt   +upstreamnt  +downstreamnt
gtgaagataatggtgacgggtgcggccggttttattgggtccgcggtgtgccgcctgttg
gcgtccgaagggcaggacgagctggtgtgcgtggacaagctgacctacgcggccagcctg
gaagccatcggtgaggttctggccgggggccgtgccgtcctggaaaaggccgatgtcgcc
gatgtcgaggccatgcgcgacatcttcaggcgccatcagccggacgccgtgatgcacctg
gcggcggaaagccatgtcgaccgctcgatcgaggggtcgggcatcttcatccgcaccaac
atcaacggcacccatgtgatgctggaaacggcgcgtgagtactggcaggccctgccggag
gagcgcaaggccgccttccgcttccaccacatctccaccgacgaggtctatggctcgctg
ggtgaggatgggctgttccgtgaggacacggcctattcgcccaactcgccctattccgcc
agcaaggcggcgtcggaccatctggtcaacgcctggtaccacacctatggcctgccgacg
ctgctcagcaattgctccaacaactacggccccttccacttcccggaaaagctcatcccg
ctgatgatcctgaacgggatggagggcaagaagctgccggtctacggcaagggcgacaac
gtccgcgactggctgttcgtggaggaccatgcccgcgccctggtgctgatcgtgcgcaag
ggcgtgccgggggagcgctacaacgttggcggcaacgccgagcagcgcaacctgtacgtg
gtggaaaccatctgtgacctgctggacgagcgcctgcccagtgccaccaagcgccgggac
ctgatcacctttgtgaccgatcgtccgggacacgaccaacgctacgccatcgatgcctca
aagatcaggcgcgagctgggatgggagccgtcggtgacattcgaggaaggcatccgccgc
acggtcgattggtacctggcgaatcgctggtggtgggaacccatccgtgaggccaagtat
tccggccagcgcctgggcgtgaccgcccccgccgcggccgccgtcggctga

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