Nitrospirillum viridazoti: Y958_22875
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Entry
Y958_22875 CDS
T04935
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
nao
Nitrospirillum viridazoti
Pathway
nao00521
Streptomycin biosynthesis
nao00523
Polyketide sugar unit biosynthesis
nao00525
Acarbose and validamycin biosynthesis
nao00541
Biosynthesis of various nucleotide sugars
nao01100
Metabolic pathways
nao01110
Biosynthesis of secondary metabolites
nao01250
Biosynthesis of nucleotide sugars
Module
nao_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
nao00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Y958_22875 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Y958_22875 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
Y958_22875 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Y958_22875 (rfbB)
00525 Acarbose and validamycin biosynthesis
Y958_22875 (rfbB)
Enzymes [BR:
nao01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Y958_22875 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Ldh_1_N
DapB_N
Motif
Other DBs
NCBI-ProteinID:
ASG23814
UniProt:
A0A248K056
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All DBs
Position
3:189212..190282
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AA seq
356 aa
AA seq
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MKIMVTGAAGFIGSAVCRLLASEGQDELVCVDKLTYAASLEAIGEVLAGGRAVLEKADVA
DVEAMRDIFRRHQPDAVMHLAAESHVDRSIEGSGIFIRTNINGTHVMLETAREYWQALPE
ERKAAFRFHHISTDEVYGSLGEDGLFREDTAYSPNSPYSASKAASDHLVNAWYHTYGLPT
LLSNCSNNYGPFHFPEKLIPLMILNGMEGKKLPVYGKGDNVRDWLFVEDHARALVLIVRK
GVPGERYNVGGNAEQRNLYVVETICDLLDERLPSATKRRDLITFVTDRPGHDQRYAIDAS
KIRRELGWEPSVTFEEGIRRTVDWYLANRWWWEPIREAKYSGQRLGVTAPAAAAVG
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
gtgaagataatggtgacgggtgcggccggttttattgggtccgcggtgtgccgcctgttg
gcgtccgaagggcaggacgagctggtgtgcgtggacaagctgacctacgcggccagcctg
gaagccatcggtgaggttctggccgggggccgtgccgtcctggaaaaggccgatgtcgcc
gatgtcgaggccatgcgcgacatcttcaggcgccatcagccggacgccgtgatgcacctg
gcggcggaaagccatgtcgaccgctcgatcgaggggtcgggcatcttcatccgcaccaac
atcaacggcacccatgtgatgctggaaacggcgcgtgagtactggcaggccctgccggag
gagcgcaaggccgccttccgcttccaccacatctccaccgacgaggtctatggctcgctg
ggtgaggatgggctgttccgtgaggacacggcctattcgcccaactcgccctattccgcc
agcaaggcggcgtcggaccatctggtcaacgcctggtaccacacctatggcctgccgacg
ctgctcagcaattgctccaacaactacggccccttccacttcccggaaaagctcatcccg
ctgatgatcctgaacgggatggagggcaagaagctgccggtctacggcaagggcgacaac
gtccgcgactggctgttcgtggaggaccatgcccgcgccctggtgctgatcgtgcgcaag
ggcgtgccgggggagcgctacaacgttggcggcaacgccgagcagcgcaacctgtacgtg
gtggaaaccatctgtgacctgctggacgagcgcctgcccagtgccaccaagcgccgggac
ctgatcacctttgtgaccgatcgtccgggacacgaccaacgctacgccatcgatgcctca
aagatcaggcgcgagctgggatgggagccgtcggtgacattcgaggaaggcatccgccgc
acggtcgattggtacctggcgaatcgctggtggtgggaacccatccgtgaggccaagtat
tccggccagcgcctgggcgtgaccgcccccgccgcggccgccgtcggctga
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