KEGG   Nitrospirillum viridazoti: Y958_25265
Entry
Y958_25265        CDS       T04935                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
nao  Nitrospirillum viridazoti
Pathway
nao02020  Two-component system
Brite
KEGG Orthology (KO) [BR:nao00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Y958_25265
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:nao02022]
    Y958_25265
Two-component system [BR:nao02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   Y958_25265
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 Mg_chelatase AAA HTH_30 HTH_50 AAA_2 RsmI_C HTH_23 DUF6716 HTH_1 AAA_7
Other DBs
NCBI-ProteinID: ASG24829
UniProt: A0A248K218
LinkDB
Position
3:787064..788398
AA seq 444 aa
MTQSPDIAPIVLFVDDEEIIRLTVRQTLELAGLAVTTYPTAEAALADISADTPGILVTDV
RLPGMSGLDLLSRVRALDAELPVVLVTGQGDVSMAVRAMQDGAYDFIEKPFVTDHFVEVI
RRALEKRALVRENRRLRQALDQNAAVENHLLGQSPALVRTRRLVADLAGTDVDVLVLGET
GSGKEQVARALHEGGPRAAFPFVAVNCGAIPDSMFESEMFGHEAGAFTGAAKRRVGKIEY
AHRGTLFLDEIESMPPALQVKLLRVLQDRALERLGGNDRVTVDLRVVAATKENLLDLANA
GRFRADLYYRLSVVTLTLPPLRDRREDIPLLFQHFALQAAARFRRPYAEPTPALLRALML
KDWPGNVRELRNAADRHALGLGEDEGSGTEGGSLADILDGVERHLITEALRASGGQVTRA
AETLGVPRKTLYDKMKRLNIGGAE
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgacgcaatcacctgatatcgcacctatagtcctgttcgtggatgatgaggagatcatc
cgcctgaccgtgcgccagacgctggagctggcgggtttggccgtgacgacctacccgact
gcggaggcggcgctggccgatatctcggccgacacgcccggcatcttggtgaccgacgtg
cgcctgccggggatgagcgggctggacctgctgtcgcgggtacgggcgctggatgcggaa
ctgccggtggtgctggtgaccggccagggcgatgtctccatggcggtgcgcgccatgcag
gacggcgcctacgacttcatcgagaagcccttcgtcaccgaccatttcgtggaggtgatc
cgccgcgccctggagaagcgcgccctggtgcgggagaaccggcgcctgcgccaggccctg
gaccagaacgcggcggtggaaaaccatctgctgggccaaagcccggccctggtgcgtacc
cgtcgcctggtggcggatctggccggcaccgatgtggacgtgctggtgctgggcgagacg
ggctcgggcaaggaacaggtggcccgcgcgctgcatgagggcgggccccgggccgcattt
cccttcgtcgccgtgaattgcggcgccatccccgacagcatgttcgaaagcgagatgttc
gggcatgaggccggcgccttcaccggggccgccaagcgccgggtgggcaagatcgaatac
gcccatcgcggcacgctgttcctggatgagatcgagagcatgccgccggccctgcaggtc
aagctgctgcgggtgttgcaggaccgggcactggaacggctgggcggcaacgacagggtg
acggtggacctgcgcgtggtggcggccaccaaggaaaacctgctggacctggccaacgcc
ggccggttccgcgccgacctttattaccggctgagcgtcgtcaccctgaccttgccacct
ttgcgcgaccggcgggaggacatccccctgctgttccagcacttcgccctgcaggcggcc
gcccgcttccgccgtccttatgccgagcccacgcccgccctgctgcgcgccctgatgctg
aaggactggccgggcaatgtgcgcgaactgcgcaacgctgccgaccgtcatgccctgggc
ctaggcgaagatgaagggtcggggaccgagggcggctccctggccgacatcctggacggg
gtggagcgccatctgatcaccgaggctttgcgcgccagtggcggccaggtgacccgggcg
gcggaaacgctgggcgtgccgcgcaagacgctgtacgacaagatgaaacgcctgaatatt
ggcggcgcagaatga

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