Nitrospirillum viridazoti: Y958_25580
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Entry
Y958_25580 CDS
T04935
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
nao
Nitrospirillum viridazoti
Brite
KEGG Orthology (KO) [BR:
nao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nao03021
]
Y958_25580 (rpoH)
Transcription machinery [BR:
nao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Y958_25580 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UCR_14kD
LysM
HTH_11
DUF6561
HTH_25
Motif
Other DBs
NCBI-ProteinID:
ASG24280
UniProt:
A0A248K0F1
LinkDB
All DBs
Position
3:complement(854610..855491)
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AA seq
293 aa
AA seq
DB search
MATLPAIPAVSSESSLSRYLQEIRRFPMLEPEKEFMLAKRWQEHEDGIAAHQLVTSHLRL
VAKIAMGYRGYGLPLSELISEGNVGMMQAVKRFDPDRGFRLATYAMWWIRAAIQEYILHS
WSLVKMGTTAAQKKLFFNLRKLKGQMQAIEDGDLSPETVTAIATKLDVPEQDVVSMNRRL
GSPDHSLNAPLRVDGEGEWQDWLVDETESQEIRLADREELGKRKALLAGAMKGLNDRERR
ILAERRLRDDPTTLEDLSQEFGISRERVRQIEVRAFEKLQKAVKNAALETHLA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggccaccttgcccgccatccccgccgtcagttcggaatcgagcctgtcgcggtatctt
caggaaatccgccgcttccccatgctggagccggagaaggagttcatgctggccaagcgc
tggcaggaacatgaggacggcattgccgcccaccagctggtgaccagccatttgcgcttg
gtggccaagatcgccatgggctaccgcggctacggcctgccgctgtccgagctgatctcc
gaaggcaacgtcggcatgatgcaggcggtgaagcgcttcgaccccgatcgcggcttccgc
ctggccacctacgccatgtggtggatccgcgccgccatccaggaatacatcctgcacagc
tggagcctggtgaagatgggtacgacggccgcgcagaagaaactgttcttcaacctgcgc
aagctgaagggccagatgcaggccatcgaggacggcgacctgtcgccggagacggtgacc
gccatcgccaccaagctggacgtgccggaacaggacgtcgtgtccatgaaccgccgcctg
ggcagccccgaccatagcctgaacgcgcccctgcgcgtggatggcgagggcgagtggcag
gattggctggtggatgagacggaaagccaggaaatccgcctggccgaccgggaagagctg
ggcaagcgtaaggccctgctggccggcgccatgaagggcctgaacgaccgtgagcgccgt
atcctggcggagcgtcgcctgcgcgacgacccgacgacgctggaggacctgtcccaggag
ttcggcatcagccgcgaacgtgtgcgccagatcgaggtgcgggcgttcgaaaagcttcag
aaggccgtgaagaacgcggcgctggagacccatttggcctaa
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