Nitrospirillum viridazoti: Y958_25650
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Entry
Y958_25650 CDS
T04935
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
nao
Nitrospirillum viridazoti
Brite
KEGG Orthology (KO) [BR:
nao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nao03000
]
Y958_25650
Transcription factors [BR:
nao03000
]
Prokaryotic type
Helix-turn-helix
Other families
Y958_25650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
HTH_8
AAA_lid_14
Sigma54_activ_2
AAA_2
AAA_5
HTH_30
PAS_8
AAA
HTH_1
Mg_chelatase
HTH_28
HTH_23
AAA_3
HTH_Tnp_ISL3
Phage_CP76
DUF815
AAA_16
AAA_7
PAS_4
Motif
Other DBs
NCBI-ProteinID:
ASG24291
UniProt:
A0A248K0N1
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Position
3:complement(868597..870468)
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AA seq
623 aa
AA seq
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MANAPQSLATALAMARERLGEAGGLEGAPVPPIIARSWRRCADRGLRADRPARQDPLSRA
DLAVLRERHHTLMHLATPELDTLHQAMRDLGGMVLLTNDRGLILDARGDAGFVRRARRVS
LQPGAGWGEDDEGTNAVGTALAERALVQVRGAEHYLTDNAFLICTAMPVMDPYGALAGVI
DLSGDTRAARSDSQGTSARSLASLAVAHLEHRWAAQAAEGHELVVRLHAHPGWLGTPQEG
LLAVDDGVVRAANPAALALLGLDAAAIGRVRLESVLDGGLARGDRILRTADSGRPLHARI
TTPGKSRPAIRRPAHAKDLSPPATAPDGMLWDAGTRPLLERAIRALDASIPVLLQGETGT
GKEVFVRAAHAACGRAQAPLVAVNCAAIPEGLLESELFGYEDGAFTGARRGGHRGQIRQA
DGGILFLDEIGDMPPALQARLLRVLQDGEVTPVGGRPVKVDFLLVTATHRDLAACVAEGT
FRADLYYRLKHLVVTLPPLRERSLDGIIDALMASFGTAERGIRLAPAARDRLRRHDWPGN
LRELANLLRTLVALSPPGTLIAPADLPPDLAPAAQTGAPAPSLKAREDDAIRQVLERHRG
NISAAARELGVHRSTLHRRMRPD
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgccccgcaaagtctggcgaccgccctggccatggcgcgcgagcggttgggc
gaggcgggcggcctggagggggctcccgtaccgcccatcatcgcgcggtcctggcgccgc
tgtgccgatcggggcctgcgcgccgaccggcccgcacgccaggatccgctgtcacgcgcc
gatctggcggtgctgcgcgagcgtcaccataccctgatgcatcttgcgacacccgagctg
gacaccctgcaccaggccatgcgtgacctgggcggcatggtgcttctgaccaacgatcgg
ggcctgatcctggatgcgcgcggcgacgccggctttgtccgccgcgcccgccgcgtctcc
ctccagcccggcgccggctggggggaggatgacgagggcaccaacgccgtgggtaccgcc
ttggcggaacgcgccctggtccaggtgcggggggcggagcattacctgaccgacaatgcc
tttctcatctgcaccgccatgccggtgatggacccctatggcgcgctggccggtgtcatc
gacctgtcgggcgacacgcgcgcggcccggtcggatagccagggcaccagcgccagaagc
ctggccagcctggcggtggcccacctggaacatcgttgggcggcgcaagcggcggagggg
cacgagctggtggtgcgcctgcacgcccatcccggctggctgggcacgccgcaggaaggc
ctgctggcggtggacgatggcgtggtgcgtgcagccaacccggcggcgctggccctgttg
ggcctggacgccgccgccatcggccgcgtgcggctggagagcgtgctggatggcggcctg
gcgcggggcgaccgtatcctgcgcactgccgacagcggccgcccgctgcatgcccgcatc
accacgccaggcaagagccgccccgcgatacgccgcccggcccatgccaaggacctgtcc
ccgccggcgaccgccccggacggcatgctgtgggatgccggcacccggccgctgctggag
cgcgccatccgggcgctggacgccagcatccccgtgctgctgcagggggagacgggaacg
ggcaaggaggtgttcgtgcgcgcggcccatgccgcctgtgggcgggcgcaggcgcccctg
gtggcggtcaactgcgccgccattccggaaggcctgctggaatccgagctgttcgggtac
gaggatggtgccttcaccggcgcccggcggggcggccatcgcggccagatccgccaggcc
gacggcggcatcctgttcctggatgagatcggcgacatgccgccggccctgcaggcccgc
ctgctgcgcgtgctgcaggatggggaggtgacgcccgtgggcggccgcccggtgaaggtg
gatttcctgctggtcaccgccacccaccgcgacttggcggcctgcgtggccgagggcacc
ttccgcgccgacctctattaccggctgaagcacctggtggtgaccctgccgcccctgcgc
gagcggtcgttggacggcatcatcgacgccctgatggccagctttggcaccgccgagcgg
ggcatccgtctggcccccgccgcccgcgaccgcctgcgccgccatgactggcccggcaac
ctgcgcgaactggccaacctgctgcgcaccctggtggccctgtcgccgccggggaccctg
atcgccccggccgacctgccgccggacctggcgcccgcagcacagaccggcgccccggcg
cccagcctcaaagcgcgggaggatgacgccatccgccaggtactggagcgccaccgtggc
aacatcagcgccgccgcccgggaactgggcgtgcaccgcagcaccctgcaccggcgaatg
cggccggattga
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