KEGG   Nitrospirillum viridazoti: Y958_26110
Entry
Y958_26110        CDS       T04935                                 
Symbol
gspD
Name
(GenBank) type II secretion system protein GspD
  KO
K02453  general secretion pathway protein D
Organism
nao  Nitrospirillum viridazoti
Pathway
nao03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:nao00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Y958_26110 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nao02044]
    Y958_26110 (gspD)
Secretion system [BR:nao02044]
 Type II secretion system
  General secretion pathway protein
   Y958_26110 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 DUF948
Other DBs
NCBI-ProteinID: ASG24363
UniProt: A0A248K046
LinkDB
Position
3:complement(1006078..1008285)
AA seq 735 aa
MIPRFLSFSLLAGVALAGCSSAPEKAGTGIPLPSAPATPKAGPDTTLFTAPASTAPRQPA
QTFSGTGEFVRPGGAVRGLGGGEGEPIDVNFVNADVRAVLDAVLGGMLNLNYTIDPKVQG
QVTIRTTRPLPRAQALAAIDTVLRAQGFAIIAGDGFYQVVPVSEAAAQAPFQRLSAAEQA
AGFSTAIVPVRFISTADIDKIVRPLTRPGLIQMVDANRNIFIVSGTAREIESFTQLVASF
DVDWLAGLSFSLFTLQSVEPAKLETELRQVLQLNAGPLQGMVEFVPLPRLNALLVAAKRP
EFLATIGSWVERLDHTSTDGGRMVHYYEVQNGSAAELAASLNRLMGRGGGSSSSSDRSGE
SARSSSRTTAASATNNSSLTGGGLGGTSAGGSGFGSNSSGFGSSGALSTSPVSPVPSPAS
AGFGSSDGGGEGEAIPELKGAKVVADERRNALLIYGTASQYAMLEQALTRLDSPREQVLI
EATIAEVTLNNDLNFGVQWFLDRGSSTAGYGTAAKLGASYPNFNYTFLTPNTQVVLNALS
SVTDVQVLSAPRLLVLNNETARLQVGDEVPVVVQQATSTLTSDSAVVNSIQYQNTGVILE
VTPRINHSGAVVLDVNQEVSSVATTTTSGIDSPTIQQRKISSIVNIQDGETVALGGLISD
TSSKSGSGIPYLSEIPVVGKLFGSDKNSHGRTELLVFLRPVIVRNVIQAREVTDALKARM
NQLEALAGANGTAPR
NT seq 2208 nt   +upstreamnt  +downstreamnt
atgattcccagattcctctcgttttcgctcttggccggcgtagcgctggccggctgctcc
agcgcacctgagaaggcgggcaccggcatacccctgccgtcggctcccgccacgccaaaa
gccggcccggacaccaccttgttcacggcgccggcatcgacggcgccccgccagccggcc
cagaccttcagcggcaccggggagttcgtccggccagggggcgcggtgcgcggtctgggc
ggcggcgagggcgaacccatcgacgtgaacttcgtcaacgccgatgttcgcgccgtcctg
gacgctgtcctgggtggcatgctgaacctaaactacacgatcgaccccaaggtccagggg
caggtcaccatccgcaccacgcgacctctgccccgcgcccaggccttggccgcgatcgat
accgtcctgcgggcccaaggtttcgccatcatcgccggggatggcttctaccaggtggtg
cccgtttccgaggcggccgcccaggcgcccttccagcggctgtccgctgccgagcaggcg
gctggcttcagcacggccatcgtgccggtacgcttcatttccacggctgacatcgacaag
atcgtccggccgctgacccggcccggcctgatccagatggtggacgccaaccgcaacatc
tttatcgttagcggcaccgcccgggaaatcgagtcattcacccagctggtcgccagtttc
gacgtcgattggctggccggcctatcgttctcgctgttcacgctccagtcggtggagccg
gccaagcttgagacggaactgcgccaggtgctgcagcttaacgctgggccactgcagggc
atggtggagttcgtgccgctgccgcgcctgaacgcgctgctggtcgcggccaagcggccg
gagttcctggccacgatcggatcgtgggtggagaggctggaccatacctccacggacggg
ggccgcatggtgcattactatgaggtgcagaacggatccgcggcggaactggcggcctcc
cttaaccgcctgatgggccgaggcggcggttcttcatcctcttcggacagaagtggcgaa
agcgctcgttcatcaagccggacgaccgcggcaagcgcgacgaacaattcctcgctgacg
ggcggaggtcttggcggcacttccgccggtggtagcggctttggcagcaattcctcaggc
tttggctccagcggcgcgctgagcaccagcccggtcagtccagtgccatccccggcatcg
gcgggtttcggcagttcggacggcggaggggagggggaagcgatcccagagttgaaaggc
gccaaggtcgtggccgatgagcggcgcaacgccctgctgatctacggcacggccagccag
tacgccatgctggagcaggcgttgacgcggctggattccccccgggaacaggtgctgatc
gaggccacgatcgccgaggtcaccctcaacaacgacctcaatttcggcgtgcagtggttc
ctggaccggggcagcagcaccgccggctacggcacggccgccaagctgggcgccagctac
cccaacttcaactacaccttcctgacgcccaatacccaggtggtgctgaacgcgctgtcc
agtgtgacggatgtgcaggtcctgtccgccccccggctgctggtgctgaacaacgagacg
gcccggctgcaggtgggtgacgaggtgccggtggtggtacagcaggcgaccagcacgctg
accagcgacagcgccgtcgtgaactccatccagtaccagaacacgggcgtgatcctggag
gtgacgccccgcatcaaccacagcggggccgtggtgctggacgtgaaccaggaggtcagc
agcgtggcgaccacgaccacctcgggcatcgacagccccaccatccagcagcgcaagatc
agcagcatcgtcaacattcaggacggggagacggtggccctgggcggtctgatcagcgac
acctccagcaagtccggcagtggtatcccttacctcagcgagatcccggtggtgggcaag
ctgttcggcagtgataagaacagtcatggccggactgagctgttggtctttctgcggccg
gtgatcgtgcgcaacgtgatccaggcccgggaggtgacggatgccctgaaggcccgcatg
aaccagctggaagcgctcgcgggggcgaatggtaccgccccgcgctga

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