Nitrospirillum viridazoti: Y958_29410
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Entry
Y958_29410 CDS
T04935
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
nao
Nitrospirillum viridazoti
Pathway
nao00541
Biosynthesis of various nucleotide sugars
nao01100
Metabolic pathways
nao01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
nao00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Y958_29410 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
nao01005
]
Y958_29410 (rfaD)
Enzymes [BR:
nao01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
Y958_29410 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
nao01005
]
Core region
Y958_29410 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
ASG25421
UniProt:
A0A248K3W4
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All DBs
Position
4:complement(296116..297102)
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AA seq
328 aa
AA seq
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MIVVTGGAGFIGSNLVAGLEARGIGPIVVVDRLRQGGKWLNLAKRGLHDMITPEQLPEFL
ERHEDDISAIFHMGAISATTETDADRIFENNFRLTLDLWSWCASRGVRLIYASSAATYGD
GTQGFEDDFTAKGLAALRPLNPYGWSKHLFDRRARAALDRGEVTPPQFAGLKFFNVYGPN
EYHKGDMRSVPAKLYPQIMAGEAARLFASDRPDYPDGGQVRDFIWVGDVVNVMLWLYDTP
SVSGVFNLGTGRARSWNDLVTSLFTAAGLPPRIDYIPMPAHLKGKYQYYTQASMGRLRAA
GYSAPFTELEDGICRYVQAYLATPTPYV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgatcgttgttacgggtggggccggattcattggttccaatttggtcgccggcctggaa
gctaggggtatcggcccgattgtcgtggtcgaccggctccgccaagggggaaagtggctc
aacttggccaagcgcggcctgcacgatatgatcacccccgagcagcttccggaattcctg
gaacgtcatgaggacgacatcagcgccatcttccatatgggcgcgatttccgcgacgacc
gaaacggacgcggaccgtatcttcgagaacaacttccgcctgacccttgacctgtggtca
tggtgcgccagccgtggcgtccggctgatttacgcgtcttcggcggcgacttacggggac
ggcacgcaaggtttcgaagacgactttactgctaagggcctggcggccctacggccgctg
aacccatatggctggtccaagcatctgttcgatcgccgggcgcgggcggcgttggaccgg
ggggaagtgacgccgccacagttcgccggactgaagttcttcaacgtatatggccccaac
gagtatcataagggggacatgcgttcggttcccgccaagctctatccccaaatcatggct
ggagaagccgcccggctgttcgcatccgaccgtccagattatcccgatggcggccaagtg
cgcgacttcatctgggtgggcgacgtcgtcaacgttatgctttggttatatgacaccccg
agtgtcagcggcgtgttcaacctcggtaccggccgtgcccgcagttggaacgatctagtg
acctcactcttcaccgcagccgggttgccccctcgtatcgactacatacccatgccggcc
catctcaaaggcaaatatcaatactacacacaggcgtcgatggggcggctgcgcgcggcc
ggctattcagcccctttcacggaactcgaggatggcatttgccgttacgtccaggcttat
ttggcgacgcccaccccctacgtttaa
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