Nitrospirillum viridazoti: Y958_29485
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Entry
Y958_29485 CDS
T04935
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nao
Nitrospirillum viridazoti
Brite
KEGG Orthology (KO) [BR:
nao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nao03032
]
Y958_29485
03400 DNA repair and recombination proteins [BR:
nao03400
]
Y958_29485
Enzymes [BR:
nao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Y958_29485
DNA replication proteins [BR:
nao03032
]
Prokaryotic type
DNA Topoisomerases
Y958_29485
DNA repair and recombination proteins [BR:
nao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Y958_29485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ASG25104
UniProt:
A0A248K3S7
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All DBs
Position
4:315746..316795
Genome browser
AA seq
349 aa
AA seq
DB search
MSDEAGLVYVSDSDPGIRRRKSGSGFRYCLPDGATVRDPVLRARIRALVIPPAWTDVWIC
ADAHGHLQVTGRDAKGRKQYMYHPAFRQAREGAKFHHLIDFARRLPQIRDRVARDLALPG
LPRDKVLATIVHLLGTTLIRVGNADYARDNQSYGLTTLRAAHVSVEKSSLRFDFKGKSGK
LWRLKVTDRRVARIVKACQELPGQPLFQYLDGDGNRREVSSADVNAYLREAAEGKGAKRE
DGVTAKDFRTWAGTVMMALALNDSPPPTSPTHGRRMVTAALKQVAARLGNTVTVCRQCYV
HPVIMDDYLAGRFRLRLRQDGPAGLSPAEAAVLTVLRRAEKRRDAGNLS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgaggcgggcctggtctatgtcagcgacagcgatcccggcatccggcggcga
aagtccggatcgggctttcgctattgcctgccggacggcgccacggtgcgcgaccccgtg
ttgcgggcccgcatcagggccctggtcatcccgccggcctggacggatgtatggatctgc
gccgatgcccatggccacctccaggttaccggccgcgacgccaaagggcgcaagcagtac
atgtaccaccccgctttccgccaggcgcgggaaggggccaagttccaccacctgatcgat
ttcgcccgccgcctgccgcaaatccgcgaccgggtagccagggatctggccttgcccggc
ttgccccgcgacaaggtgctggccaccatcgttcacctgctgggcacgacgctgatccgc
gtgggcaacgccgattacgcccgcgacaaccagagctacggcctgaccaccctgcgcgcc
gcccacgtcagcgtggagaagtcgtccctgcgcttcgacttcaagggcaagagcggcaag
ctttggcggctgaaggtgaccgaccggcgggtggcccggatcgtgaaggcctgccaggaa
ctgcccggccagccccttttccaatatctggacggtgacggtaaccggcgggaagtcagt
tccgccgacgtgaacgcctatctgcgcgaggcggcagaggggaagggggccaagcgtgag
gacggggtgacggccaaggatttccgtacctgggccggcacggtcatgatggccctggcg
ttgaacgacagcccgccgcccaccagccccacccatggccggcgcatggtcaccgccgcg
ttgaaacaggtggcggcccgcttgggcaacaccgtcaccgtctgccgccaatgctatgtc
cacccggtgatcatggacgattacctggcgggccgtttccggttgcgcctgcgccaggat
gggccggcggggctgtccccggcggaggccgcggtgctgaccgtgctgcgccgggcggaa
aagcgccgggacgcggggaacttgagctga
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