Nautilia sp. PV-1: C3L23_03765
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Entry
C3L23_03765 CDS
T05986
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
nap
Nautilia sp. PV-1
Pathway
nap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C3L23_03765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nap03400
]
C3L23_03765
DNA repair and recombination proteins [BR:
nap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
C3L23_03765
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
DUF968
MutS_II
HNH_2
Spe-44
AAA_21
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AZV46414
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Position
678411..681164
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AA seq
917 aa
AA seq
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MDVNKLLSSKKLLTEIYFDLQKYYDDIYPNAVVLMEVGTFFETYEAEGVGKAREIANVLN
IQLTKKNKSIPEIDVKNPLMAGFPNHALDRYLEKLIEENRYTIILIKQKGTPPNVKRYLS
EIISPGVNLEYSKTPENYVTSIIVEKYSAFHVGFANVDVTTGKSYVYENYSTKDDPTFAL
DELFRLLQTYKSHEIILTLKNVECDEIVNYLELDGKNIVINRTRMDIKYQNEIFKRVYNI
QSLLSPIEVMNFEKFPLITESLGILLEFVIAHNKDLLSKLKEPVLIEDDKFVYLGNNPIK
QLEIYKVLKLIDKTKTAMGKRLIKERLFNPIRDEAELEKRYKSVAFMLNRYQEFESLLRE
IYDLEKIDRKIKLKKLHPFEITFLLNSLESVSEIYLKLKKRTTKIDFFVEFIKRNFELDK
INVKFEDIKESFFKRGIDKNLDELVDEKEKYILQLKKIKNKIESLGDVKVEINQLDKEGF
YFSLTKNRFNMIKDKFSESFVDIDGEKLFLDDLRVKQLTNSVKISGDFIDEISDKIIALQ
NKIIKKTSKIFIKKLGEIEKEFDILQNIANEIAKIDVAVSSAKIAKELNYSKPKLKNKKA
SFKALRHPLIEINQENGVYVPNDIDFNEYDGMLLYGINSSGKSSLMKSVGIAVFLAQGGF
FVPCEKMEFTPYQGIFTRIEASDNLTKGLSTFAVEMLELKNIFNRANEHSLVLGDEIAHG
TETTSALAIVASAVVKLAKRKINFLFATHLHQLMDIDEVKNLSNVVAKHLEVWFDGEKLV
YDRKLKDGSGSSVYGLEFAKSIYMDGEFIKLAENIRKKLTDEYSEIELLLKKKKSRYNKN
LFVTTCAICGKPVEDVHHIKEKEKAKEGFIDHMPVHHKYNLIPLCKKHHKMVHEGKIRIT
GFVTTSKGIELHFEEAD
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggacgttaataaactactctcgtctaaaaaacttttaaccgagatatattttgacctg
caaaaatattatgacgatatatatcccaatgccgtagtattaatggaagtcggaacattt
tttgaaacttatgaggccgagggagtcggaaaagccagggaaattgcaaatgtattaaat
atacagcttacaaaaaagaataaatccattcccgaaattgacgttaaaaaccctctgatg
gcaggatttccgaatcatgcgcttgatcgctatcttgaaaaacttatagaagaaaacaga
tatacaattattctgataaaacaaaaaggaactccgccaaatgttaaaagatatcttagt
gaaataatatctccaggtgtaaatcttgaatattcaaaaactcctgaaaattacgtaact
tcaataatagtagaaaagtattccgcttttcatgtagggtttgcaaacgttgatgtaaca
accggaaaaagttacgtatatgagaattattcgacaaaagacgatccgacttttgctttg
gacgaactgtttagactgcttcagacatataaaagtcatgaaattatacttacgcttaaa
aacgttgaatgtgatgaaattgtaaattatctggaactggacggaaaaaacattgtaatc
aacagaacaagaatggatataaaatatcaaaatgagatatttaaaagagtttataacatt
cagagtctgctgagtcccattgaagtaatgaattttgaaaagtttcctttaattactgaa
tcattgggtatattgcttgagtttgtaatagcccataataaagaccttttaagtaaactt
aaagagcctgtgcttatcgaggatgacaagtttgtgtatttaggaaacaatcctataaaa
cagcttgaaatttataaagttttaaaacttatagacaaaactaaaaccgccatgggaaaa
agacttattaaagaaagacttttcaatcccatcagagatgaagcggaacttgaaaaaaga
tataaatccgttgcttttatgttgaaccggtatcaggaatttgaatctctgctgagagaa
atatatgatcttgaaaaaatagacagaaaaataaaacttaaaaaactccatccgtttgaa
attacttttttacttaattctcttgaatctgtaagcgaaatttatttaaagctgaaaaag
agaacaacaaaaatagatttttttgtagagtttataaaaagaaattttgaactggataaa
attaacgtaaagtttgaagatattaaagaaagtttttttaaacgcggaatagataaaaat
cttgatgagcttgtagacgaaaaagagaaatatatattacagctgaaaaaaataaaaaac
aaaatcgaatctttgggtgatgtaaaagtggagattaaccagcttgataaagaagggttt
tatttcagtcttaccaaaaacagatttaatatgattaaagacaaatttagtgagagcttt
gtagatattgacggagaaaaactttttttagatgatttgagagtaaaacagcttacaaac
agtgttaaaataagcggagattttattgatgagataagtgataaaattattgcccttcaa
aataaaattataaaaaagacaagtaaaatattcattaagaaattaggggagatagaaaag
gaatttgatattttacaaaacatagcaaatgaaatagccaaaatcgacgtagctgtcagc
agtgcaaaaattgctaaggaattgaattattcaaaacctaaattaaaaaacaaaaaagca
tcttttaaagccctgaggcatcctttgattgaaataaatcaggaaaacggtgtttatgtt
ccgaatgatatagattttaacgaatatgacggaatgcttttatacggaattaacagctcg
ggtaaaagctctctgatgaaaagcgtaggaatagctgtgtttttggctcagggaggtttt
ttcgttccgtgtgagaaaatggaatttactccttatcaggggatttttaccagaattgaa
gccagtgataatttaactaaaggtctttcaacttttgccgttgaaatgttggaacttaaa
aatatattcaaccgtgcaaacgagcattcccttgtattgggagatgaaatagcacacggg
actgaaacaacttcggctttggctattgtggcaagtgccgttgtgaaacttgcaaaaagg
aaaataaacttcctgtttgccacacaccttcatcagcttatggatatagatgaggtaaaa
aatctttcaaacgtagtggcaaaacatcttgaagtgtggtttgacggagaaaaactcgta
tatgacagaaaacttaaagacggaagcggcagcagtgtttacggacttgaattcgcaaaa
tctatttacatggacggtgaatttataaaactggcagaaaatataagaaaaaaactgacc
gatgaatacagtgaaatcgagcttctacttaagaagaaaaaaagcagatataacaaaaac
ctgtttgttacaacctgtgcaatttgcggcaagccggttgaagatgttcatcatataaaa
gaaaaagaaaaagcaaaagagggatttatcgaccatatgccggttcatcacaaatacaat
ctcatacctttatgtaaaaaacaccacaaaatggttcatgaagggaaaataagaataacc
gggtttgtcactacaagcaaagggattgagcttcattttgaagaagcggattag
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