Nautilia sp. PV-1: C3L23_04115
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Entry
C3L23_04115 CDS
T05986
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nap
Nautilia sp. PV-1
Pathway
nap03420
Nucleotide excision repair
nap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3L23_04115
03430 Mismatch repair
C3L23_04115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nap03400
]
C3L23_04115
Enzymes [BR:
nap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3L23_04115
DNA repair and recombination proteins [BR:
nap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3L23_04115
MMR (mismatch excision repair)
Other MMR factors
C3L23_04115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
ResIII
U3snoRNP10
Motif
Other DBs
NCBI-ProteinID:
AZV46481
LinkDB
All DBs
Position
749151..751178
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AA seq
675 aa
AA seq
DB search
MPLSKLNKEQLQAATADLGHNLVIASAGTGKTSTIVGRIAYLLQEGIKPEEILLLTFTNK
AANEMKERVGSFLPEAKNIEAGTFHAVSYRWLKRLNKNIVLKQPKDLKILFKSIYDKRDF
LRIRGEEKPYSSNYLFDLYSLFLNSNADDFSEWLAQRAPLQEEYALVYESIFDEYEEIKK
AHGLVDFNSLLIRMIEELKNGIEVPFKEVLVDEYQDTNPLQNELIESIKQSSLFCVGDYD
QSIYAFNGADISIISTFDKRYPDANVFTLKKNYRSYGEILEIANKVIANNPRIYPKNLEV
TRGFSGEWPKVLYYNDTFEEYRDVANRILNSSVSRDEIAVLFRNNSSADAIEAMLREKGI
ECRRKGGVSFFDSREIKITLDILTFIVNPKDIMAFIHIFEYAKGVGSAIANEIFEALMTL
GDGDAKKGFLNPDLSKKVFTKKKTSYQLGLFDDFAQLGSVSKFKSVGMDEVFLANPILKH
PKLSVEGGEFLYNFYKLLKRLNKLKNPHSVFNEIIASKTFKHIIQNIAKERSKDKNGKII
EEKYLEALEKIENKVKVLGNLLRNYNDLEKFLNAMVLGANEMSEGRGVNLLTVHASKGLE
FKEVYLVDLMEKRFPNIKLSKPAGGIEEERRLFYVAVTRAKDRLFLCLAKNDRIRNLSYE
PSRFLSEAGYKIEVK
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
ttgccgctttctaaacttaataaagaacagctgcaggctgcgacggctgatcttggacac
aatcttgtaatagcaagcgccggaacaggcaagacttctacaatagtgggaagaatagcc
tatctgcttcaagaagggataaaacctgaagaaatactgcttttaacgtttacgaacaaa
gccgcaaacgaaatgaaagaaagggtcggaagttttttaccggaggctaaaaatatagaa
gcgggcacgttccacgccgtaagttacagatggcttaaaaggcttaataaaaatattgtt
ttaaaacagcctaaagatttgaaaatactgtttaaatctatttatgacaaacgcgatttt
ttgcgtataagaggcgaggaaaagccttacagttccaattatctgtttgatctgtattcg
ctttttttaaattccaacgcggatgattttagtgaatggcttgctcaaagagcccctttg
caggaagagtatgcactggtttatgagagtatattcgatgaatatgaggaaattaaaaaa
gcgcacgggttggttgattttaattcgcttttgattagaatgattgaagagcttaaaaac
ggcattgaagtgccgtttaaagaagtgcttgtggatgaataccaggatacaaaccccctg
caaaacgaactgattgaaagcatcaaacaaagttcgcttttttgtgtaggtgattatgac
cagagtatttatgcctttaacggagccgacataagtattatttccacttttgacaaacgc
tatcccgatgcgaacgtttttacccttaagaaaaattacagaagttacggcgaaattttg
gaaatcgcaaataaagtaatagcgaataatccgagaatttatcctaaaaatctggaagtt
acaaggggattttccggagaatggcctaaggtgctttattataacgatacttttgaggaa
tacagggatgttgcaaacagaattcttaattcaagcgtcagcagggacgaaatagccgta
ctgttccgtaataattcaagtgcagacgcgatagaggcaatgcttagggaaaaaggaatt
gagtgcagaagaaaaggcggggtcagtttttttgattccagagagataaaaattacattg
gatatactgactttcattgttaatccaaaggatattatggcatttatacatatttttgaa
tacgcaaaaggagtcggaagcgctatagcgaatgaaatatttgaagcattgatgactctg
ggagacggagacgcaaaaaaaggctttttaaatcctgacctttcaaaaaaggtgtttaca
aagaaaaaaacctcataccagctgggactgtttgacgattttgcccagcttggaagcgta
agcaagtttaaaagcgtaggaatggatgaagtgttcctggcaaacccgatactgaaacat
ccgaaactttctgttgaaggaggggagtttttatataatttttataagctgctaaaaaga
ttaaataaacttaaaaatccgcattccgtttttaatgaaattattgccagcaaaacgttt
aaacatataatacagaatattgcaaaagaaagaagcaaagataaaaacggtaaaataatt
gaagaaaaatatcttgaagctcttgaaaaaatagaaaataaagttaaggttttaggcaat
cttttaagaaattacaacgatttggaaaaatttttaaacgctatggttttaggagcaaat
gaaatgagcgagggaagaggggttaaccttctgactgttcatgcgagcaaaggccttgaa
tttaaagaagtttatcttgtggatttgatggaaaaaagatttccgaatataaaactttca
aaaccggcaggcggtattgaagaagaaaggcgtctgttttatgtagccgttacaagggca
aaagacaggctgtttttatgtcttgccaaaaatgacagaatcagaaatctctcttacgaa
ccaagcagatttttaagcgaagcaggttataaaatagaagtaaaataa
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