Nautilia sp. PV-1: C3L23_04430
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Entry
C3L23_04430 CDS
T05986
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nap
Nautilia sp. PV-1
Pathway
nap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C3L23_04430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nap03019
]
C3L23_04430
03016 Transfer RNA biogenesis [BR:
nap03016
]
C3L23_04430
Enzymes [BR:
nap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C3L23_04430
Messenger RNA biogenesis [BR:
nap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C3L23_04430
Transfer RNA biogenesis [BR:
nap03016
]
Prokaryotic type
tRNA degradation factors
C3L23_04430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_2
PIN_5
P16-Arc
DUF7228
S1_RRP5
PTCRA
Motif
Other DBs
NCBI-ProteinID:
AZV46544
LinkDB
All DBs
Position
813983..816151
Genome browser
AA seq
722 aa
AA seq
DB search
MSCEVELNINNRKQKFVLNKVAKQANASVWFEDGNTVMLATLTYNPDEMVEEDFVPLVVQ
YVEKAYAVGKIPAGFVKREQKPGDFETLTARIVDRSLRPLFPKEYGYNTVLTVMALSADE
DSDLQTAAMNAAAACMYLSDLPFAKMVYGVRATRIKGEVIINPTLSQLEEGDFNLFVTGT
KDELLMIEFAAQGQEEVEIIPVDDIMLDGVPVENTIVKYRINEIKEDELVEILAKVQEAI
KEGAEAYEEALKPFKKEAVKFEERKEEDISEYIELIRSKYSNELREIIKHLSKSERDYLL
KQFARKIASALNKEEEFENILKAVKQVKREIVRSMILNEGIRADGRKLDEIRPISIETNV
LPRAHGSCLFTRGQTQALAVATRGGDMDAQVYGNLTDKEEKLEKFMLHYNFPAFSVGEAE
RLGPPSRRELGHGNLAKRAIEPLIDPEYEETVRVVSEILESNGSSSMATVCASSLAMKAA
KVPLLKMAAGIAMGLITEDNKYAILTDIMGLEDHDGDMDFKVAGTFDGITAMQMDIKLGG
ISLDVLKQALFQARDARAFILELMENAAKEIKYNEDVLPKALSFKVDPDKIIDIIGTAGK
TVKEIIAKFGVTIDLDRDTGKVKIYGDDHDSLNGAKDYILNVICKDDRPKTPEFEIGKII
EGEIKRVVDFGMFIEIAPGVEGLLHKSKLNGKNPSDFKEGDKIKVKVLSQSGFKIELALV
EE
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtgaagtagaattaaatattaataacagaaaacagaagtttgttttaaataaa
gttgcaaaacaggcaaacgcctctgtctggtttgaagacggaaatacagtaatgcttgct
acgcttacgtataatcctgatgaaatggtggaagaagattttgttccgcttgtggttcag
tatgttgaaaaagcgtatgctgtgggaaaaatacctgcgggatttgtaaaaagagaacaa
aaaccgggagattttgaaactttaacggcgagaatcgtagacagaagtttaagaccgctt
ttccctaaagagtacggatataataccgtccttacggtaatggctttaagtgcggatgaa
gacagtgatttacaaacagcagcgatgaatgctgcggctgcatgtatgtatttaagcgat
ctgccttttgcaaaaatggtatacggtgttagagccactagaataaaaggcgaagttatt
ataaacccaacattaagccagcttgaagaaggagatttcaatctgtttgttaccggaaca
aaagacgagcttttaatgatagagtttgccgctcagggacaggaagaagttgaaataatt
cctgttgacgatatcatgcttgacggtgttcctgtagaaaacacaattgtaaaatacaga
ataaacgaaattaaagaagacgaacttgtagaaatacttgcaaaagttcaggaagccatt
aaagaaggcgcggaagcatatgaagaagcgttaaaaccgtttaaaaaagaagctgttaaa
tttgaagaaagaaaagaagaagatattagcgagtacatcgaactcataagaagcaaatat
tctaatgaattgagagaaatcattaaacatttaagtaaaagcgaaagagattatcttcta
aaacagtttgcaagaaaaatagcttcggctttaaataaagaagaagaatttgaaaatata
ttaaaagctgtaaaacaggttaaaagagaaattgtcagaagtatgattttaaatgaaggt
atcagggctgacggaagaaaacttgacgaaataagacctatatctattgaaacgaatgtg
cttcctagagcacacggaagctgtctgtttacaagaggacagactcaggcgcttgccgta
gctactaggggcggtgatatggatgctcaggtttacggcaatctgacagataaagaggaa
aaacttgagaaattcatgcttcattataattttcctgcgtttagcgtaggagaagctgaa
agattaggaccgccaagcagaagggaacttggccacggaaatctcgcaaaaagagcgatt
gaaccgttaattgatcctgaatatgaagaaactgtaagggttgtaagcgaaatacttgaa
agtaacggttcttcttcgatggctactgtatgcgccagttctcttgcgatgaaggcagct
aaagttcctcttcttaaaatggccgccggtattgcgatgggtcttatcactgaagacaac
aaatatgcaatattgaccgatattatggggcttgaggatcatgacggagatatggacttt
aaagttgcgggaactttcgacggtattaccgcaatgcagatggatataaaactcggaggt
atttctcttgatgtgcttaaacaggctctgttccaggcaagagacgctagagcgtttata
ttagagcttatggaaaatgctgcaaaagaaataaaatataacgaagacgtactgcctaaa
gctttaagctttaaggtggatcctgacaaaattatcgatataatcggtactgcaggaaaa
accgtaaaagaaattattgctaaattcggtgtgacaatagaccttgacagagatacaggc
aaagttaaaatatacggtgatgatcatgactctttaaacggagctaaagactatatttta
aatgttatatgcaaagacgacagaccgaaaactcctgagtttgagataggtaagattatt
gaaggagaaattaaaagagtagttgatttcggaatgtttatagaaatagctcccggtgtg
gaaggacttctacataaatcaaaattaaacggtaaaaatcctagcgactttaaagaaggg
gataaaataaaagtaaaagtgctttctcaaagcggatttaaaattgagttggcgttagtg
gaagagtaa
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