Nautilia sp. PV-1: C3L23_05720
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Entry
C3L23_05720 CDS
T05986
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
nap
Nautilia sp. PV-1
Brite
KEGG Orthology (KO) [BR:
nap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nap03016
]
C3L23_05720
Enzymes [BR:
nap01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
C3L23_05720
Transfer RNA biogenesis [BR:
nap03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C3L23_05720
Prokaryotic type
C3L23_05720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AZV46789
UniProt:
A0A3T0L2P2
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All DBs
Position
complement(1073138..1074214)
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AA seq
358 aa
AA seq
DB search
MIYSHSPINFHFNKNSENFFVEEIPLYSFDHTGEWLMLKVRKKDATTNEVVSQFSKLGIN
KRDIGYAGLKDKDGLTVQWFSVPRKIRAKINEFSHPKIKIVEQDLHRNKLKIGHLKGNRF
FVRLKKVLPVDAKKIERVLIDIKKYGIPNFFGYQRFGKYGDNFEQAKEFIFGDRYIKDKR
LQKLLISAYQSKLFNDWLMERIKLSNIFDMKEDELKFVGYEKELIKFIKKQKHPFKLLPG
DVMCHYPFGKNFYLEILEDSERFYKKDIVPTGLLPGKKALRAKDYARKIEEKYDELIPAN
GDRRSAWIFPEILEKTYIKEKAWYEFSFILPKGSYATVLVEILKNGITDNLITYKGEK
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgatatattcacattctcccataaacttccactttaataaaaattcagaaaattttttt
gttgaagaaattcctctttattcattcgatcatacaggtgaatggttaatgcttaaagtc
agaaaaaaagacgctactactaatgaagttgtgagccagttttccaaactcggcataaat
aaaagggatataggttacgccggtcttaaagacaaagacggattaacggtccagtggttt
agcgtcccaagaaaaataagagccaaaataaatgaattttcccatccaaaaataaaaata
gtagagcaggatctgcatagaaataaacttaaaataggacatttaaaaggcaacaggttt
tttgtaagactaaaaaaagtacttccggtagacgctaagaaaatagaaagagtgcttata
gatattaaaaaatacggaattccgaattttttcggttatcagagattcggtaaatacgga
gataattttgaacaggcgaaagagtttattttcggtgacagatatattaaagacaaaaga
cttcaaaaactgcttataagcgcctatcagtcaaagctgtttaacgactggcttatggaa
aggataaagctcagcaatatctttgatatgaaagaagacgagctaaaatttgtgggatat
gaaaaagaacttattaagtttataaaaaaacaaaaacatccgtttaaacttcttccgggc
gatgtaatgtgtcattatcctttcggaaaaaatttctatcttgaaattttggaagacagt
gaaaggttttataaaaaagacattgtccctacaggtcttctgccaggtaaaaaagcactc
cgtgccaaagattacgcaagaaaaattgaagaaaaatacgatgaactgattcctgcaaac
ggagacagaagaagtgcctggattttccctgaaatattggaaaaaacatatataaaagaa
aaagcctggtatgaattttcttttattcttcctaaaggaagctacgctaccgtattggtt
gaaattcttaaaaacggtattaccgataatctgattacttacaaaggagaaaaatga
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