Nautilia sp. PV-1: C3L23_08075
Help
Entry
C3L23_08075 CDS
T05986
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
nap
Nautilia sp. PV-1
Pathway
nap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C3L23_08075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nap03019
]
C3L23_08075
03009 Ribosome biogenesis [BR:
nap03009
]
C3L23_08075
Enzymes [BR:
nap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C3L23_08075
Messenger RNA biogenesis [BR:
nap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C3L23_08075
Ribosome biogenesis [BR:
nap03009
]
Prokaryotic type
rRNA helicases
C3L23_08075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
SecA_DEAD
AAA_30
Helicase_RecD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AZV47232
UniProt:
A0A3T0L3W9
LinkDB
All DBs
Position
complement(1523440..1524843)
Genome browser
AA seq
467 aa
AA seq
DB search
MTFTDFNLKKELLRRLEEIGFEKPSPIQEKAIPAVLEGRDIVAQAQTGTGKTAAFGLPIL
NMLKKGQKALIITPTRELAIQVSEEIFRFGKYLGIHTATVYGGSSYSRQINHIKNSEVIV
ATPGRLIDLLSSGKIDIAPEYVVLDEADEMLDMGFLDDIKEIFKYVPSSRQTLLFSATMP
KPILSLAQTILKEPEFIQITKKEVTNENIKEYFYVIDEHERNDALIRLIDYKQPSKAIVF
CRTKKDVDLVAEFLSGVGFDAKGLHGDMDQRKREEVIRGFKGNRIEILVATDVAARGLDV
NDVTHVFNYHLPLDPESYVHRIGRTGRAGKEGMAISLVTPHEFRALSKIQKISKIELKEV
PTLSDVKNTEIQKIMEKISSIKPNDKSIEIVEVLQNDFDLFTIATKFASMLFEKEADGKE
RIGKSLNEAKRLIERSKNSKGGNDRDKKRGRRGNFRGGRSGGRGRRR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacatttacagattttaatttaaaaaaagaattattaagaagattggaagaaatcggt
tttgagaaaccaagtccgattcaggaaaaagcgattcctgcagtattagaaggaagagat
atcgtagctcaggcccagacgggtacagggaaaactgcggcattcggtctacctatactt
aatatgcttaaaaaaggtcaaaaagcattaattattacaccaacccgtgaacttgcaatt
caggtaagcgaagagattttcagattcggaaaatatctcggaattcatactgcaacagtt
tacggaggaagcagctattcaagacagattaatcatattaaaaattcggaagtaatcgta
gcgactcccggaagacttatagatcttttaagcagtggtaaaatcgatatagcacctgaa
tacgtagtgcttgacgaagcggatgaaatgcttgatatgggatttttggacgatattaaa
gaaattttcaaatacgttccgagcagcagacagacactgttattcagcgccactatgcca
aaaccgattttaagtcttgcccagacaattttaaaagaacctgaatttattcagattacc
aaaaaagaagttacaaacgaaaatattaaagaatatttttatgtgattgacgaacatgaa
agaaacgacgctttaataagacttatcgattataaacagcctagcaaggctatcgttttt
tgcagaactaaaaaagacgttgatttagtagctgaatttttaagcggtgtaggatttgac
gcaaaaggtcttcacggagatatggaccaaagaaaaagagaagaggttataagaggattt
aaaggcaacagaatcgaaatccttgtagctacagatgttgcggcaagaggacttgacgta
aacgacgtaacacacgtatttaactatcacttaccgctagatcctgaaagttacgtgcat
agaatcggaagaacaggaagagccggcaaagagggtatggcgatatcgcttgtaacgcct
catgaattcagagctttaagcaaaattcagaaaatttctaaaatagaacttaaagaggtt
ccgactttaagcgacgttaaaaatacagaaattcaaaaaattatggaaaaaatcagcagt
attaagcctaatgacaaatcaattgaaattgttgaagtattgcaaaatgattttgacctg
tttactattgcgacaaaatttgcaagcatgctttttgaaaaagaagccgacggaaaagag
agaatcggtaaaagtctgaatgaagccaaaagacttattgaaagaagtaaaaattcaaaa
ggcggaaacgacagagacaaaaaaagaggaagaagaggaaacttcagaggcggtagatca
ggcggaagaggcagaagaagataa
DBGET
integrated database retrieval system
