Neisseria animalis: D0T90_05050
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Entry
D0T90_05050 CDS
T06425
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
naq
Neisseria animalis
Pathway
naq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
naq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D0T90_05050 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
naq03021
]
D0T90_05050 (rpoC)
03400 DNA repair and recombination proteins [BR:
naq03400
]
D0T90_05050 (rpoC)
Enzymes [BR:
naq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D0T90_05050 (rpoC)
Transcription machinery [BR:
naq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D0T90_05050 (rpoC)
DNA repair and recombination proteins [BR:
naq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D0T90_05050 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QEY23941
UniProt:
A0A5P3MT29
LinkDB
All DBs
Position
1053150..1057328
Genome browser
AA seq
1392 aa
AA seq
DB search
MNLANLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLK
SLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQLLTEDDYYNKLDEYGDDFDA
KMGAEGIRELLRTLDVAGEIEVLRQELESTGSDTKIKKIAKRLKVLEAFHRSGMKLEWMI
MDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKRM
LQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVG
PYLRLHQCGLPKKMALELFKPFIFHKLEKQGLASTVKAAKKLVEQEVPEVWDILEEVIRE
HPIMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQM
EARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTRDRINGKGEGSLFADVKEVHRAYH
TKQVELGTKITVRLREWVKNEAGEFEPVVNRYETTVGRALLSEILPKGLPFEYINKALKK
KEISKLINASFRLCGLRDTVIFADHLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEAN
AEVKEIEDQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMMDNLSKQKVIDREGNEVEQES
FNSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHG
ARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDR
ILGRVTASDVVDPSSGETLVEAGTLLSEQLVDLIDQSGVDEVKVRTPITCKTRHGLCARC
YGRDLARGKLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTA
RFSSQMRYVANNKGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGAAIKAGQTL
ATWDPHTRPMITEHAGSVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSASASKLLRP
TVKLLDENGLEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITG
GLPRVAELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIITDVDGAAYETLISKEKQIL
VHDGQVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVII
RQMLRRVNIADSGDTPFITGEQVERGDVMIENEKAIAEGKEPARYENVLLGITKASLSTD
SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQPVE
AENTEQAEDTAE
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggcaaatttattcaatccgctgcaaaccgccggcatggaagaagagtttgac
gccatcaaaatcggtattgcctctcccgagacaatccgttcttggtcttacggcgaagtg
aaaaagccggaaaccatcaactaccgtacattcaagccggagcgcgatggtttgttctgt
gccaagattttcggcccggtaaaagactacgaatgcttgtgcggcaaatataagcgcttg
aaattcaaaggcgtaacctgtgaaaaatgcggcgtggaagtaaccttgtccaaagtgcgc
cgcgagcgtatgggtcatatcgagttggcggcgcctgtcgcacacatctggttcttgaaa
tccctgccgtcccgtctgggcatggtattggacatgaccctgcgcgacatcgagcgcgta
ctgtatttcgaggcatttgtcgtgaccgatccgggcatgacaccgctgcaacgccgccaa
ctgctgactgaagacgattactacaataagctcgacgagtacggcgatgatttcgatgcc
aagatgggtgcggaaggtatccgcgaattgctgcgtactttagatgtggcaggtgaaatc
gaagttttgcgccaagagttggaatctaccggctctgataccaaaatcaagaaaattgcc
aaacgtctgaaagtattggaagcattccatcgttcgggcatgaaattggaatggatgatt
atggacgtgctgccggtattgcctccggacctgcgtccgttggtaccgctggacggcggc
cgtttcgctacttccgatttgaatgatttgtaccgccgcgtcatcaaccgcaacaaccgt
ctgaaacgcctgctcgaactgcacgcgcccgacattattgtgcgtaacgaaaaacgtatg
ctgcaagaagcggtggacagcctgctggacaacggccgccgcggtaaagccatgaccggt
gccaacaaacgtccgctgaaatcattggcagacatgattaaaggtaagggcggccgtttc
cgccaaaacctgttgggtaagcgcgtggactactcaggccgttctgtgattactgtcggt
ccttacttacgcctgcaccaatgcggcctgccgaaaaaaatggcattggagctgttcaaa
ccgtttattttccacaaattggaaaagcaaggcttggcttctactgttaaggccgccaaa
aaactggtggagcaagaagtgccggaagtatgggatatcttggaagaagttatccgcgaa
catccgattatgctcaaccgtgcgccgactctgcaccgtttgggtattcaagcgtttgag
ccgattctgatcgaaggcaaagccatccagctgcatccgttagtgtgtgccgcattcaat
gccgacttcgacggtgaccaaatggccgttcacgttccattgagcctcgaagcgcaaatg
gaggcgcgtacgctgatgctggcttcaaacaacgtattgtctccggccaacggcgaaccg
attatcgtaccttcgcaagatatcgtattgggcctgtactacatgacccgcgaccgcatt
aacggtaaaggcgaaggcagcttgtttgccgatgtgaaagaagtacatcgtgcctaccat
accaaacaagtggaattgggtacgaaaatcaccgtccgcttgcgcgagtgggtaaaaaat
gaagcaggcgaatttgaaccggtagtcaaccgttatgaaaccacagtcggccgggctttg
ctgagcgagattctgccgaaaggcctgccgtttgaatacatcaacaaagcattgaagaag
aaagaaatttccaagctgattaatgcttcgttccgtttgtgcgggctgcgtgataccgtt
atcttcgccgaccatttaatgtataccggtttcggttttgctgccaaaggcggtatctcg
attgccgtggacgacatggaaatcccgaaagagaaagccgcattgttggcagaagccaat
gccgaagtgaaggaaatcgaagaccaataccgccaaggtttggtaaccaacggcgaacgc
tacaacaaagtagtggatatctggggtcgtgccggcgataaaattgccaaagcgatgatg
gacaacttgtcgaaacaaaaagtaatcgaccgcgaaggcaatgaagtcgaacaagagtcg
ttcaactccatctacatgatggccgactccggtgcgcgtggttctgctgcccagatcaaa
cagctttccggtatgcgcggcttgatggccaaaccggacggttcgattatcgaaaccccg
attacctccaacttccgcgaaggcctgaccgtattgcaatactttattgcgacccacggt
gcgcgtaaaggtctggcggataccgcgttgaaaaccgcaaactccggttatctgacccgc
cgtttggtggacgtaacccaagacttggttgtggtagaggacgattgcggcacttcagac
ggctttgtcatgaaagcagtcgtacaaggcggtgacgtaatcgaagcgctgcgcgaccgt
atcttaggccgcgtaactgcttccgatgtcgtcgatccgtccagcggcgaaacattggtt
gaggcaggtacgctgctgagcgagcaattggttgatttgattgaccaatccggtgtcgat
gaagtgaaagtccgcaccccgattacctgtaaaacccgtcacggtttgtgcgcccgttgt
tacggacgcgacttggcgcgcggcaaactggtcaatgccggcgaagcagtcggcgtgatt
gcagcccagtccatcggcgaaccgggtacccagctgaccatgcgtaccttccacatcggt
ggtgcggcctcccgtgccgcagcagccagccaagtggaagccaaatccaacggtacggcg
cgtttcagcagccaaatgcgctatgtcgccaataacaaaggcgaactggtggtgattggc
cgctcttgcgaagtcgtcattcatgacgacatcggccgcgagcgcgaacgtcataaagta
ccttacggcgcgattttgctggtacaagacggcgcagccatcaaagcaggccaaactttg
gcaacatgggatccgcatacccgtccgatgattaccgaacatgccggttcggtgaaattc
gaaaacgtagaagaaggtgtaaccgtagccaaacaaaccgacgatgtaacaggcctgtct
acattggtggttatcgacggcaaacgccgttcggcatccgcttccaaactgttgcgcccg
acagtgaagctgctggacgaaaacggcttggaaatctgtatcccgggaacttcgacaccg
gtatccatggccttccctgtaggagccgtgattaccgtgcgcgaaggacaggaaatcggt
aaaggcgacgtattggcgcgtatcccgcaagcctcttccaaaacccgcgatattaccggc
ggtctgccgcgtgtggcagaattgttcgaagcacgcgtacccaaagatgccggtatgctg
gcagagattaccggtaccgtatccttcggcaaagaaaccaaaggcaagcaacgcttaatc
attaccgatgtagatggagctgcttatgaaaccttgatttctaaagagaagcagattctg
gtgcatgacggccaagtcgtaaaccgaggcgaaaccatcgttgacggagcggttgacccg
cacgatatcctgcgtctgcaaggcatcgaagcattggcacgttacatcgtacaagaggta
caagaagtgtaccgtctgcaaggtgtgaagatttccgacaaacacatcgaagtcatcatc
cgccaaatgctgcgtcgtgtgaacatcgccgactcgggcgataccccgttcatcaccggt
gagcaagtcgagcgcggtgacgtgatgattgaaaacgagaaagccattgccgaaggcaaa
gagcctgcgcgttatgaaaacgtattgctgggtattaccaaagcatcgctttctaccgac
agctttatctcggccgcatcgttccaagaaaccacccgcgtgcttaccgaagccgcgatt
atgggcaaacaggacgagttgcgcggtttgaaagaaaacgtgattgtaggccgtctgatt
cctgccggtaccggtctgacctaccaccgcagccgccatcaacagtggcagccggttgag
gcagaaaataccgagcaggcagaagataccgcagagtaa
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