Nocardioides aquaticus: ENKNEFLB_00096
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Entry
ENKNEFLB_00096 CDS
T07580
Symbol
rapA_1
Name
(GenBank) RNA polymerase-associated protein RapA
Organism
naqu
Nocardioides aquaticus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QVT77731
UniProt:
A0ABX8EDS5
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Position
97865..100738
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AA seq
957 aa
AA seq
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MGFVPLTGPAELAEAAPGARPGEAVVAFTAADGGRRVELPVRAALPVLTKAHARDDVHPS
VGLLAGAALLALRLVAAGRLAPDAVGDGWRIAPLPAEDDDRVAQLALARSHDGLAPDQAE
AVVRRVLDAVADTMPRTASRPPRARPAERVAPGDFAERLAARLDRLRAPAPTGQVDRTPP
ARRAEDDDRPQLVRLALRVEADEEDLSAGSVRLVLQVHDELDPLHLCEAVDLWADPDATD
GAGHGFGVRARTHAAIALRAAAEAWPVLDRMLDGPTPAELTLSGEDLASLLEDGVAALGA
RGVDVLWPRSLGRDLTATSVLDRVDPRHPQDRGPATGPGPHEEPLQDPLLGPDSVFAFRW
QLALHGEDLTAAEMDALADAASPLLRLRGGWTVVDPATARKARKRLQRTVAPTRAIAAAL
TGTVPVEPGTGLPPDTPVVVGASLLKVREQLVGAATTEPVPPPPGLRAELRDYQRHGLTW
LATLTGLGLGGCLADDMGLGKTVTLVALHLHRTSRGATGPTLVVCPASLLGNWEAEIRRF
APGVRVRRFHGGERTHEDLAPDATGATGPGADTRGFVLTTYGTMRRDAERLGTTAWDLVV
ADEAQHVKNARSSTARALRTIDSAARVALTGTPVENDLTELWAILDWTVPGLLGSRNAFR
KVWAAPIESGLEPTKARQFADLIGPFLLRRRKSDPGIAPELPAKTETDHLLRLTREQVVL
YEAFCRDTLARIERADEDARRGLVLALLTGCKQICNHPAQFLKQSGGRLRGRSEKLDLLE
ELLTTVVAEGGAVLVFTQYVAMARLVEQHLTAVGVPHQLLHGGTPVPQREAMVASFQAGE
VPVFLLSLKAGGTGLNLVRADHVVHLDRWWNPAVEDQATDRAHRIGQTRPVQVHRLVAQG
TIEERIGQLLARKRSLADAVLGRGEAALTELSDAELHDLVRLRQPDGPDGPDGPDGP
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
gtgggtttcgtcccgctgaccgggccggccgagctcgccgaggccgcacccggcgcacgc
cccggcgaggccgtggtggcgttcaccgccgccgacgggggccgacgggtcgagctgccg
gtgcgcgccgccctgccggtgctcaccaaggcccacgcccgcgacgacgtgcaccccagc
gtcggtctcctggccggcgcggcgctgctggcgctgcgcctcgtggcggccggtcggctg
gcgccggacgcggtcggcgacggctggcggatcgccccgctgccggccgaggacgacgac
cgggtcgcgcagctggccctggcccgctcccacgacggtctcgcgcccgaccaggccgag
gccgtcgtgcgccgggtgctggacgccgtggccgacacgatgccgcgcaccgcctcccgc
ccgccccgggcccggccggccgagcgcgtcgcgcccggtgacttcgcggagcggctggct
gcccggctcgaccggctgcgcgcacccgccccgacagggcaggtcgaccggacgccgccg
gcgcggcgggccgaggacgacgaccggccgcagctggtccgcctcgcgctccgggtcgag
gccgacgaggaggacctgtcggccggctcggtgcggctcgtgctccaggtccacgacgag
ctggacccgctgcacctctgcgaggccgtggacctctgggcggaccccgacgcgaccgac
ggggcgggtcacgggttcggcgtccgggcccgcacccacgccgccatcgcgctgcgcgcg
gcggccgaggcgtggccggtgctcgaccggatgctcgacgggcccacgcctgcggagctg
accctcagcggcgaggacctcgcgagcctgctggaggacggggtcgccgcgctcggcgcc
cggggcgtcgacgtgctgtggccccgcagcctcggccgggacctgaccgcgaccagcgtg
ctcgaccgggtcgacccccgccacccgcaggaccggggtccggcgaccgggccggggccg
cacgaggagccgctccaggacccgctcctcggtcccgactcggtcttcgccttccgctgg
cagctcgcgctgcacggcgaggacctgaccgcggccgagatggacgcgctggccgacgcc
gcctcaccgctgctgaggctgcgcggtggctggacggtcgtcgaccccgccaccgcgcgc
aaggcccgcaagcggctgcagcgcaccgtggcccccacccgcgcgatcgccgccgcgctg
accggcaccgtgccggtcgagccgggcaccggcctgccccccgacaccccggtcgtggtg
ggcgcgtcgctgctgaaggtgcgcgagcagctggtcggcgcggccacgacggagccggtg
cccccgccgccggggctccgggcggagctgcgggactaccagcggcacggcctgacctgg
ctggccacgctgaccggcctcggcctcggcggctgcctggccgacgacatgggactgggc
aagaccgtcaccctcgtcgcgctgcacctgcaccggacctcccgcggcgccaccgggccg
accctcgtcgtctgcccggccagcctgctcggcaactgggaggccgagatccgccgcttc
gcccccggggtgcgggtccggcgcttccacggcggggagcggacgcacgaggacctcgcc
cccgacgcgacgggtgcgaccgggccgggcgccgacacccggggcttcgtgctgaccacc
tacggcaccatgcgccgcgacgccgagcgcctcggcaccaccgcctgggacctggtggtc
gccgacgaggcccagcacgtcaagaacgcccggtcctcgacggcccgggcgctgcgcacc
atcgacagcgccgcccgggtcgccctgaccgggacccccgtcgagaacgacctcaccgag
ctgtgggcgatcctcgactggaccgtgccgggcctcctgggcagccgcaacgccttccgc
aaggtgtgggcggcccccatcgagtccggcctcgagccgaccaaggcacgccagttcgcc
gacctgatcggaccgttcctgctgcggcgtcgcaagtccgaccccggcatcgcccccgag
ctgccggccaagaccgagaccgaccacctgctgcgcctgacccgggagcaggtcgtgctc
tacgaggccttctgccgcgacaccctggcccgcatcgagcgcgccgacgaggacgcgcgc
cgcggcctcgtgctggccctgctgaccgggtgcaagcagatctgcaaccacccggcgcag
ttcctgaagcagtccggggggcggttgcgcggccggtccgagaagctggacctgctcgag
gagctgctcaccacggtcgtcgccgagggcggcgcggtgctcgtcttcacgcagtacgtc
gcgatggcccgcctcgtcgagcagcacctcaccgccgtcggcgtgccgcaccagctgctc
cacgggggcaccccggtcccgcagcgcgaggccatggtcgcgtccttccaggccggggag
gtcccggtcttcctgctctccctcaaggccggtggcaccggcctcaacctggtccgcgcc
gaccacgtcgtccacctcgaccggtggtggaacccggccgtcgaggaccaggcgaccgac
cgtgcccaccggatcgggcagaccaggcccgtccaggtgcaccgcctggtcgcccagggc
accatcgaggagcggatcgggcagctcctggcccgcaagcggtcgctggccgacgcggtc
ctggggcgcggggaggcggcgctgaccgagctcagcgacgccgagctgcacgacctcgtc
cgcctgcggcagcccgacggaccggacgggccggacgggccggacgggccgtga
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