Nocardioides aquaticus: ENKNEFLB_00115
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Entry
ENKNEFLB_00115 CDS
T07580
Symbol
fpg2
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase-like protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
naqu
Nocardioides aquaticus
Pathway
naqu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
naqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ENKNEFLB_00115 (fpg2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naqu03400
]
ENKNEFLB_00115 (fpg2)
Enzymes [BR:
naqu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ENKNEFLB_00115 (fpg2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ENKNEFLB_00115 (fpg2)
DNA repair and recombination proteins [BR:
naqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ENKNEFLB_00115 (fpg2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
FeS_assembly_P
Zn_ribbon_8
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
QVT77749
LinkDB
All DBs
Position
complement(117550..118416)
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AA seq
288 aa
AA seq
DB search
MPELPEVEALALDLRQRLDGRAITKIHLAAFSALKTYDPPLTALEGTLVDDVTRHGKFLD
IEASGTHLVLHLARAGWVRWRDEVPEKPPSASNKSPLALRVVLDPEAGLDVTEAGTRKSL
AAYVVRDPLDVPGIASLGPDPLTDDFTLDAFKVILEREGRKQVKGVLRHQGTIAGIGNAY
SDELLHAARMSPYKPASSLDEEEVQTLYAAIRGVLGDAVARNRGLAASELKGEKKTHMAV
HGRTGEACPVCGDTVREVSFADSSLQYCPTCQTGGKPLADRRTSKFLK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcttcccgaggtcgaggcgctggccctcgacctgcgccagcggctcgacggc
cgggcgatcaccaagatccacctggccgcgttcagcgcgctgaagacctacgacccgccg
ctgaccgcgctggaggggacgctggtcgacgacgtcacccggcacggcaagttcctcgac
atcgaggcctccggcacgcacctcgtgctgcacctggcccgcgcggggtgggtgcgctgg
cgcgacgaggtccccgagaagccgccgagcgcgagcaacaagtcgcccctggcgctgcgg
gtggtcctcgaccccgaggccgggctcgacgtgaccgaggccggcacccgcaagtcgctc
gcggcctacgtcgtgcgcgacccgctcgacgtgcccggcatcgccagcctcggccccgac
ccgctcaccgacgacttcaccctcgacgccttcaaggtgatcctcgagcgcgagggccgc
aagcaggtcaagggcgtgctgcgccaccagggcacgatcgccggcatcggcaacgcctac
tccgacgagctgctccacgccgcgcggatgtcgccgtacaagcccgcgagcagcctggac
gaggaggaggtgcagacgctgtacgccgcgatccgcggcgtgctcggcgacgcggtcgcg
cgcaaccggggtctcgcggcgagcgagctcaagggcgagaagaagacccacatggccgtg
cacgggcggacgggcgaggcgtgccccgtctgcggcgacaccgtgcgggaggtgtccttc
gccgactcgagcctgcagtactgcccgacctgccagaccggcgggaagccgctggcggac
cggcggacgagcaagttcctgaagtag
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