Nocardioides aquaticus: ENKNEFLB_00324
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Entry
ENKNEFLB_00324 CDS
T07580
Symbol
ytlP
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
naqu
Nocardioides aquaticus
Brite
KEGG Orthology (KO) [BR:
naqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
naqu03016
]
ENKNEFLB_00324 (ytlP)
Enzymes [BR:
naqu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
ENKNEFLB_00324 (ytlP)
Transfer RNA biogenesis [BR:
naqu03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
ENKNEFLB_00324 (ytlP)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QVT77955
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All DBs
Position
332834..333445
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AA seq
203 aa
AA seq
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MRVFAALVPPVAAREDLADFLAPRWEAGRADGLRWTDPEQWHVTLAFAADVDDWRLEEAE
ERLAAAAARSEPLVGAVAGGGAFPDPVGAKVVWAGLVLDGGGAAVLGRLAVGARTALATA
GAEVDGARFRPHLTLARRNRPGRVDDWLRLLDGYRGPVGAYEHLTLVASHLGEGPRGRPR
HEVLAELPLGGSPPGAVGQPATP
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
gtgagggtcttcgcggcgctggtgccgccggtcgcggcgcgtgaggacctcgcggacttc
ctcgccccgcggtgggaggccggacgggccgacgggctgcggtggaccgaccccgagcag
tggcacgtgacgctggcgttcgccgcggacgtcgacgactggcgcctcgaggaggcggag
gagcggctggcggccgcggcggcgcggtcggagccgctggtgggcgccgtcgccggcggc
ggcgcgttcccggaccccgtcggggcgaaggtggtgtgggccggcctggtgctggacggt
gggggtgcggccgtgctggggcggctcgcggtcggcgcccgcacggcgctggccaccgcg
ggcgccgaggtcgacggtgcgcggttccgcccgcacctcaccctggcccgccgcaaccgg
cccggtcgggtcgacgactggctccgcctgctcgacggctaccgcggcccggtcggggcg
tacgagcacctcacgctggtggcctcccacctcggcgagggaccccgcggccggccgcgg
cacgaggtgctcgccgagctgcccctgggtgggagcccgcccggggccgtgggtcagccc
gcgacgccgtag
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