Nocardioides aquaticus: ENKNEFLB_00333
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Entry
ENKNEFLB_00333 CDS
T07580
Symbol
lsrB
Name
(GenBank) Autoinducer 2-binding protein LsrB
KO
K10559
rhamnose transport system substrate-binding protein
Organism
naqu
Nocardioides aquaticus
Pathway
naqu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
naqu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ENKNEFLB_00333 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
naqu02000
]
ENKNEFLB_00333 (lsrB)
Transporters [BR:
naqu02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
ENKNEFLB_00333 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
QVT77964
LinkDB
All DBs
Position
340271..341308
Genome browser
AA seq
345 aa
AA seq
DB search
MKLSNRRVPALAAMTLVTALSLTACGGDDGGSGGEGGGGESAGAGVTMLPKNLGNPYFDA
SATGATRASEEFGGSFEIVGPDTATPDAQVPFINTAAQQGVDSLVVSANDPTAICDALEE
ASSAGTKVVTFDSDTDPECRDLFISQADAEGIATSQVDLIAEQIGGAGEVAILSAAANAT
NQNTWIELMQEYAASEYPDIEIVDVVYGNDDDQTSFDQTAALLQSYPDLAGIISPTTVGI
AAAARYLSTSDAQGEVALTGLGTPNQMREYVEDGTVQSFALWNPEELGYLAAYAADALVS
EEITGEEGDSFSAGDLGDYEVGADGVVVLGDPTVFDESNIDDFDF
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcagcaaccgacgcgtcccggccctggccgcgatgaccctggtgaccgccctg
tccctgaccgcctgcggcggcgacgacggaggctcgggcggcgagggcgggggcggcgag
agcgccggcgccggcgtgacgatgctgcccaagaacctcggcaacccctacttcgacgcg
agcgcgaccggtgcgaccagagcgtcggaggagttcggcggcagcttcgagatcgtcggt
cccgacaccgccacgccggacgcccaggtgccgttcatcaacaccgccgcccagcagggc
gtcgacagcctggtggtctccgccaacgacccgaccgccatctgcgacgccctcgaggag
gccagcagcgccggcaccaaggtcgtcaccttcgactccgacaccgaccccgagtgccgc
gacctgttcatcagccaggccgacgccgagggcatcgccacctcgcaggtcgacctgatc
gccgagcagatcggcggggcgggcgaggtcgcgatcctctccgcggccgccaacgccacc
aaccagaacacctggatcgagctcatgcaggagtacgccgcctcggagtaccccgacatc
gagatcgtcgacgtggtctacggcaacgacgacgaccagacctccttcgaccagaccgcg
gcgctgctccagtcctaccccgacctggccggcatcatcagcccgaccacggtcggcatc
gccgccgcggcccgctacctgtccacctcggacgcccagggggaggtcgcgctgaccggt
ctcggcacgcccaaccagatgcgtgagtacgtcgaggacggcaccgtgcagtccttcgcg
ctgtggaaccccgaggagctcggctacctcgccgcgtacgccgccgacgccctggtctcg
gaggagatcaccggcgaggagggcgactccttcagcgccggcgacctgggcgactacgag
gtcggcgccgacggcgtcgtcgtgctcggcgacccgaccgtcttcgacgagtcgaacatc
gacgacttcgacttctga
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