Nocardioides aquaticus: ENKNEFLB_00426
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Entry
ENKNEFLB_00426 CDS
T07580
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
naqu
Nocardioides aquaticus
Brite
KEGG Orthology (KO) [BR:
naqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
naqu03032
]
ENKNEFLB_00426 (topA)
03400 DNA repair and recombination proteins [BR:
naqu03400
]
ENKNEFLB_00426 (topA)
Enzymes [BR:
naqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ENKNEFLB_00426 (topA)
DNA replication proteins [BR:
naqu03032
]
Prokaryotic type
DNA Topoisomerases
ENKNEFLB_00426 (topA)
DNA repair and recombination proteins [BR:
naqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ENKNEFLB_00426 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QVT78054
UniProt:
A0ABX8ECF9
LinkDB
All DBs
Position
437593..440337
Genome browser
AA seq
914 aa
AA seq
DB search
MSHKLVIVESPAKARNIGGFLGDGYVVESSIGHIRDLPMSAADTPAEIKDKPWGRLAIDV
DNEFTPYYVVPRDKKQHIAKLKKLLKDADELYLATDEDREGEAIAWHLLDELKPKKGVPV
HRMVFHEITKPAIQAAVANPRTINDDLVEAQETRRILDRLYGYEVSPVLWKKVMSGLSAG
RVQSVATRLVVDRERERIKFKVASYWDLEGTFDAGSKHEQRMFGARVHSVDGARVARGSD
FGPDGLLKSSAQGKVVHLDRGRAEALVSGLADSTYDVRSVEAKPYRRSPYAPFRTTTLQQ
EASRKLGMGASVTMSVAQRLYENGHITYMRTDSTTLSSAAVDAARAQVRELYGAEYVPDA
PRVYASKVKNAQEAHEAIRPAGDTFRTPAQTGLTGEQFRLYELIWMRTVASQMRDATGQS
VTIRLGGAASTGEDVVFSASGRVISFHGFLKAYVEGTDHGAATDDQESRLPALEQGDAVS
AASLSADGHETKPPARYTEATLVKELEEREIGRPSTYASIMKTIVDRGYVYKKGTALVPA
WLAFSVTRLLEEHFPRQVSYEFTAAMEDVLDDIAGGRKDRSTELAEFYYGAGEVTGLKRL
VDELGDIDARELATFPIGGPESGINLRVGRYGPYLEGPDDEGNALAKRANVPDDLPPDEL
TLEKAAELFASPAGEEIPLGAHPETGLAVVAKNGRYGPYVTEQLPEDAAKSAKPRTGSLF
KSMSLDTITLDEAVTLLSLPRVVGTDPESGDEITAQNGRYGPYLKKGTDSRSLTTEDQLL
TIGLDEALAIYAQPKQRGRAAAAPPLKELGPDPVSGFPVVVKAGRFGEYVTDGEYNATLR
KEDSVEKVTIERAAELLAERRAKGPAKTAKKGAKKAPAKKTAAKKTAAKKTAAKKTTAKK
TAAKKTTKAAAKKA
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccacaagctggtcatcgtcgagtcgccggccaaggcccgcaacatcggcgggttc
ctcggcgacggctacgtcgtcgagtcctccatcggtcacatccgtgacctgccgatgtcg
gccgcggacaccccggccgagatcaaggacaagccctggggccggctggcgatcgacgtg
gacaacgagttcacgccgtactacgtggtgccgcgcgacaagaagcagcacatcgccaag
ctgaagaagctgctgaaggacgccgacgagctctacctggccacggacgaggaccgcgag
ggcgaggccatcgcgtggcacctgctcgacgagctgaagcccaagaagggcgtcccggtg
caccggatggtcttccacgagatcaccaagcccgcgatccaggccgccgtggccaacccg
cgcaccatcaacgacgacctcgtcgaggcccaggagacgcggcgcatcctcgaccgcctc
tacggctacgaggtcagcccggtgctgtggaagaaggtcatgtccggcctctccgcgggg
cgcgtgcagtccgtggccacccgcctggtcgtcgaccgcgagcgcgagcggatcaagttc
aaggtcgcctcgtactgggacctcgagggcaccttcgacgccggcagcaagcacgagcag
cggatgttcggcgcccgggtgcactccgtcgacggcgcccgcgtggcccgcggctccgac
ttcggtcccgacgggctgctgaagtcctcggcccagggcaaggtcgtccacctcgaccgt
ggccgcgccgaggcgctggtctccgggctggccgactcgacgtacgacgtccgctcggtc
gaggccaagccctaccgccgctccccgtacgcgcccttccgcaccaccacgctgcagcag
gaggccagccgcaagctcgggatgggcgcctcggtgacgatgtcggtggcgcagcggctg
tacgagaacggccacatcacctacatgcggaccgactccacgaccctgtccagcgcggcc
gtggacgcggcgcgcgcgcaggtccgggagctctacggcgccgagtacgtccccgacgcc
ccgcgcgtctacgcctccaaggtgaagaacgcccaggaggcgcacgaggcgatccggccg
gccggcgacaccttccgcaccccggcccagaccgggctgaccggcgagcagttccgcctc
tacgagctgatctggatgcgcaccgtcgcctcgcagatgcgcgacgccaccgggcagagc
gtgacgatccgcctcggcggcgccgcctcgaccggcgaggacgtcgtcttctcggccagc
ggccgcgtgatcagcttccacggcttcctcaaggcctacgtcgagggcaccgaccacggc
gccgccaccgacgaccaggagagccggctgcccgcgctcgagcagggcgatgccgtctcg
gcggcctcgctgagcgccgacggccacgagaccaagccgccggcccgctacaccgaggcc
accctggtcaaggagctcgaggagcgcgagatcggtcgcccctcgacgtacgcctcgatc
atgaagaccatcgtcgaccgtgggtacgtctacaagaagggcaccgcgctggtcccggcg
tggctggccttctcggtcacccggctgctggaggagcacttcccccgccaggtgtcctac
gagttcaccgccgcgatggaggacgtcctcgacgacatcgccggcggccgcaaggaccgc
agcaccgagctcgcggagttctactacggcgccggcgaggtcaccggcctcaagcggctg
gtcgacgagctcggcgacatcgacgcccgcgagctggcgaccttcccgatcggcggcccc
gagtcgggcatcaacctgcgggtcgggcgctacgggccgtacctcgagggtcccgacgac
gagggcaacgcgctggccaagcgggccaacgtgcccgacgacctgccccccgacgagctg
accctggagaaggccgccgagctgttcgccagcccggccggcgaggagatcccgctgggc
gcgcacccggagaccgggctcgcggtggtcgccaagaacggccggtacggcccgtacgtc
accgagcagctgcccgaggacgcggccaagtccgccaagccgcgcacgggttcgttgttc
aagtcgatgtcgctggacacgatcaccctcgacgaggccgtcacgctgctctcgctgccc
cgcgtggtcggcaccgacccggagtcgggcgacgagatcaccgcccagaacggccgctac
ggcccgtacctgaagaagggcaccgactcgcggtcgctgaccacggaggaccagctgctg
acgatcggcctcgacgaggcgctggcgatctacgcccagcccaagcagcgtggccgcgcc
gccgcggccccgccgctcaaggagctcggtccggacccggtctcgggcttcccggtcgtg
gtcaaggccggccgcttcggcgagtacgtcaccgacggcgagtacaacgccaccctccgc
aaggaggactcggtggagaaggtgaccatcgagcgcgccgccgagctgctggccgagcgc
cgcgccaagggcccggcgaagacggccaagaagggcgcgaagaaggccccggccaagaag
accgccgcgaagaagacggcggccaagaagacggcggccaagaagaccaccgccaagaag
acggcggccaagaagacgacgaaggctgcggcgaagaaggcgtag
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