Nocardioides aquaticus: ENKNEFLB_00440
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Entry
ENKNEFLB_00440 CDS
T07580
Symbol
rhsB_1
Name
(GenBank) putative deoxyribonuclease RhsB
Organism
naqu
Nocardioides aquaticus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
TEN_YD-shell
FAD_binding-like
Motif
Other DBs
NCBI-ProteinID:
QVT78068
LinkDB
All DBs
Position
455600..461149
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AA seq
1849 aa
AA seq
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MSGIGPIEEDVRFDHGAAQHLVTLAGSTASTVESQRGSRLAWASTAMGEFRGYFSTLFAG
NAETADADAEQVVVGLRDVARFVGQLADSAREEQARRETAREWQREQEDRNLLEKGIDGG
KSLLGMGEDKPPVGDMPEPPSYAPTVVAPRPRQNPGAGSGGAGGTSSARPADLRTFATGS
QGANGTLAGKPSSCRSAYDAFVAGCGWGHLEASSVFTGFDRWLDANAEDVLWTTTVADAF
ATAGSDADVSTLSDSAVAAALQAAGVDASRQDLDIDPPTAYGNPPSSGYADDPVNAATGN
FIENEADLGFAGGTASLSLDRTYNSFDTGTGAFGPGWSSWTEAGLTLDDEAARLRLPDGR
VVSFGRLGEAWDRAAGEDLWLDRTRDAASGDERLVVTGSDGTRWTFDRAGRPLTSSRGPG
TTVRLVHEVVGGEARLVRLEHERGRSIDLTWDVERVGGPRVVAALASDGRPVTYDYDDAG
RLLRATTPRGTRSYAWDEASLITSVTDADGVVEAENTYDEHRRVRRQRSQHGRFSRFVYL
PGRVTVVSDEDGSRSNTWVSDAKGRVVGIVDAEEHRQSTSYDAHGHPVLQTARDGSTTIH
EHDERGRRVRTVTPSGADVTYGYDEHDRVTTVVAESGAVTEYTYPAADEASDPATGVPRN
PVRVVDPEGGVTGLSWSDGLMTGLVDPTGVTVRFTYDEHGDLVATTDATGRTARLERDGT
GRVVAALSPGGHRTTYTYGAAGQLVSRRDADGAVWRYEHTAAGRLTAVVDPTGARTEVER
DAHGEESRTIDPLGRAITRRVDDLGNVAAAELPDGSTWEFAHDALSRLVATTDPAGGTWR
NEYDTTGGLTATVDPTGVRKEVSADRATGTVSVDDGSATLSTSFDPLGRATRSEQADGSA
AMATYDRCGRPVELLDADGGLTLVARDAAGRPVAITSPSGAVTRREYDECGRLVAVVDPT
GARTTQEYDADGRVARQVLPTGEVAWVERDAMGRVTARFTPGAGIARYAYDAAGRVVRSS
DTWHGQRRYRYDAAGQLVEVANGNGGVTRWEYDANGRAVAITDPLGQVTRREFDAMNHCT
AETDPLGRTTRAGYDAAGRQVWQTDPDGRLTEWAYDAQGRLASTAVDGRVVSSISRDLRA
RRLVLTDRTRTDGPGEGAVVRHELEWDRRGRMVSRTRDGRGVSWTYDADGRRTSMTTPDG
STTSYERDAAGRLLAVEHPLLGRASLTRDAAGRVVSASAGGTLQTWEHADGFVVGHTVTD
AEGATRTTIERDELGRVATVAREDRVTSYEYDGAHQLLATRTGSTAPGSRASETRWRYDA
AGRLVSESLDGSTREYVHDAAGQLLSVTGPDGTVTRHAYDGAGRRARTDLPDGGVRRFSW
SSTGFLSAVGEQSAAGAGDVVERRTEVHVDAHGELADVDGTEVFWDSADPYAPGLVQAGA
TSVVGAGPVTGVGSTDSGADGSGGWSAAGWRTARSAATADDPWGVGGGMELPGGLEIGTS
GEVSLPGAGGLELLGARVYDPTSRGFLSVDPLDPVVGSGWSGNPYSYAGNDPVHAVDPTG
LRPISDAELNAYIGSTKGPLGHATDAVGDWAKDNWEYVAAGAMIVAGAALMIAPVPGVAQ
AAGMALISAGIDTGIQKATTGEVNWGQVAVSGAAGAIGFGAGGLLARGGASAVKVAVAEG
VTEGVVSGAGGYLTGPGPHTPEGLLRNTAMGAGTGVLPGPAMGDDAVRAGTRSLDDVPPV
THPPRADFIASADGVVIPTSRSRLEGGFNDAGFPAAPTDRPGTGYTLPDGSKVRVMDPSG
QAPARASFTNANNGPVDAFTGKPIQPPSGLTGPERKAYVRERSHVELDP
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggatcggtccgatcgaggaggacgtgcgcttcgaccacggggcggcgcagcac
ctcgtcaccctggccggcagcaccgcgtcgacggtcgagtcgcagcgcggctcccgtctc
gcctgggcgagcacggcgatgggggagttccggggctacttctcgaccctcttcgccggc
aacgccgagaccgcagacgcggacgccgagcaggtcgtcgtcggcctgcgtgacgtggcc
cgcttcgtgggtcagctcgccgactccgcccgcgaggagcaggcccgccgcgagacggcc
cgtgagtggcagcgcgagcaggaggaccgcaacctcctcgagaagggcatcgacggaggc
aagagcctgctcggtatgggcgaggacaagcccccggtcggtgacatgccggagccgccg
tcctacgccccgaccgtggtggcgccccgaccccgccagaaccccggcgccgggagcggc
ggggccggcgggacctcctcggcccgtccggccgacctgcgcaccttcgccaccggctcc
cagggcgccaacggcaccctcgccggcaagccgtcgtcctgccggagcgcctacgacgcg
ttcgtcgccggctgcggctgggggcacctcgaggccagcagcgtctttaccggcttcgac
cgctggctggacgcgaacgccgaggacgtcctctggaccaccaccgtcgccgacgccttc
gccaccgccggcagcgacgccgacgtgtccaccctgagcgacagcgcggtcgcggccgcg
ctgcaggccgcgggggtcgacgcctcgcgccaggacctcgacatcgacccgccgacggcc
tacggcaacccgccctccagcgggtacgccgacgaccccgtcaacgccgcgacgggcaac
ttcatcgagaacgaggccgacctcggcttcgccggcggcacggcgtcgctgtcgctggac
cgcacctacaactccttcgacaccggcacgggtgccttcggcccgggctggtcgagctgg
accgaggccgggctgaccctcgacgacgaggccgcccggctgcgcctgcccgacggccgc
gtggtctccttcggccgcctcggtgaggcgtgggaccgcgccgccggggaggacctctgg
ctggaccgcacccgggacgccgcgagcggggacgagcggctcgtggtcaccggcagcgac
ggcacccgctggaccttcgaccgcgccggccggccgctcaccagctcgcgcggccccggc
acgaccgtccgcctcgtccacgaggtggtcggcggcgaggcccgcctggtccgtctcgag
cacgagcgcggccgcagcatcgacctcacgtgggacgtcgagcgcgtcggcggaccccgc
gtggtcgccgcgctcgcctccgacggccggcccgtgacctacgactacgacgacgccggc
cggctgctgcgggccaccaccccgcgcggcacgcggtcgtacgcctgggacgaggcgtcg
ctgatcacctcggtgaccgacgcggacggcgtcgtcgaggccgagaacacctatgacgag
caccgccgcgtcaggcggcagcgctcccagcacggccggttcagccggttcgtctacctg
cccggccgcgtcaccgtcgtctccgacgaggacggctcgcggtccaacacctgggtctcc
gacgcgaaggggcgcgtcgtcggcatcgtcgacgccgaggagcaccgccagtccacgtcg
tacgacgcgcacggccaccccgtcctgcagaccgcccgcgacggctcgaccacgatccac
gagcacgacgagcgcggccgccgggtgcggaccgtgacaccgtccggtgccgacgtgacc
tacggctacgacgagcacgaccgggtcacgacggtcgtcgccgagtccggcgcggtcacc
gagtacacctaccccgcagccgacgaggcgtccgacccggcgaccggcgtcccgcgcaac
cccgtgcgcgtcgtcgaccccgagggcggcgtcaccgggctgtcctggtccgacgggctg
atgaccggcctggtcgaccccaccggcgtcaccgtccgcttcacctacgacgagcacggc
gacctggtcgccaccaccgacgccacgggacgaaccgcccggctcgagcgtgacggcacc
ggccgcgtcgtcgcggccctgagccccggcgggcaccgcacgacctacacctacggcgcc
gccggccagctcgtctcgcgccgcgacgccgacggggccgtgtggcgctacgagcacacc
gccgccggccggctgacggccgtcgtcgaccccacgggcgcgcgcaccgaggtcgagcgc
gacgcgcacggcgaggagtcgcgcaccatcgacccgttgggtcgcgcgatcacccgtcgc
gtcgacgacctcggcaacgtggccgcggccgagctgcccgacggctcgacctgggagttc
gcccacgacgcgctgtcacggctggtggcgaccaccgaccccgccgggggcacctggcgc
aacgagtacgacaccaccggtggtctgaccgccaccgtcgacccgaccggcgtgcgcaag
gaggtcagcgccgaccgcgccacgggcacggtcagcgtcgacgacggctcggccaccctg
tccacctccttcgacccgctcggccgcgccacccgctcggagcaggccgacggctccgcc
gcgatggcgacctacgaccggtgcgggcggcccgtcgagctgctcgacgccgacggcggc
ctgacgctcgtcgcgcgcgacgccgcggggcgccccgtggcgatcacctctccgtcgggt
gcggtgacgcgccgggagtacgacgagtgcggccggctggtcgcggtggtcgacccgacc
ggtgcccgcaccacccaggagtacgacgccgacggccgggtggcgcgccaggtgctgccc
accggggaggtcgcgtgggtcgagcgcgacgcgatgggtcgcgtcaccgcccgcttcacc
ccgggcgccggcatcgcgcggtacgcctacgacgccgccggccgcgtggtccgctcctcc
gacacctggcacgggcagcgccgctaccgctacgacgccgcgggccagctggtcgaggtg
gccaacggcaacggcggggtcacccgctgggagtacgacgccaacggccgcgccgtggcg
atcaccgacccgctgggccaggtgacgcgccgcgagttcgacgcgatgaaccactgcacg
gccgagaccgacccgctcggccgcaccacccgtgccggctacgacgccgccgggcggcag
gtctggcagaccgacccggacggccgcctcaccgagtgggcctacgacgcgcagggccgg
ctggcctcgaccgcggtcgacgggcgggtggtctcgtccatcagccgtgacctgcgcgcc
cgccgcctggtgctgaccgaccggacccgcaccgacggtccgggcgagggcgccgtggtg
cgccacgagctcgagtgggaccggcgggggcggatggtctcgcggacccgcgacggccgc
ggggtctcctggacctacgacgccgacggccgccgtacctcgatgacgaccccggacggg
tcaacgacgtcctacgagcgcgacgcggccggccggctgctcgcggtcgagcacccgctg
ctgggccgggcgtcgctgacgcgcgacgcggcgggccgggtggtctcggccagcgccggc
ggcaccctgcagacctgggagcacgccgacgggttcgtcgtgggccacaccgtcaccgac
gccgagggcgccacccgcaccacgatcgagcgcgacgagctcggccgggtcgccacggtc
gcccgcgaggaccgcgtcacctcctacgagtacgacggggcgcaccagctcctcgcgacc
cgtaccgggtcgacggccccgggcagtcgggcctcggagacccgctggcgctacgacgcc
gcgggccgcctggtctcggagtcgctggacgggtcgacgcgggagtacgtccacgacgcg
gccgggcagctgctgagcgtcaccgggcccgacgggacggtcacccggcacgcctacgac
ggcgccgggcgccgggcgcgtacggacctgcccgacggcggcgtccgacggttctcctgg
tcctcgaccgggttcctctcggcggtgggcgagcagtccgccgctggtgccggagacgtc
gtcgagcggcgtaccgaggtgcacgtcgacgcccacggcgagctcgcggacgtggacggc
acggaggtcttctgggactccgccgacccctacgcgccaggcctggtccaggccggcgcg
acgtcggtggtgggggccggtccggtcaccggtgtcggctcgaccgacagcggggccgac
gggtccggcggctggtcggcggcggggtggcgcacggcgcgctcggccgcgacggccgac
gacccgtggggcgtcgggggcggcatggagctgcccggaggcttggagatcgggacctcg
ggcgaggtctcccttccgggcgcgggtgggctggagctgctgggcgcccgggtctacgac
ccgacctcgcgagggttcctctcggtcgacccgctcgacccggtggtcgggtcggggtgg
tcgggcaacccgtactcctacgccggcaacgacccggtgcacgccgtcgacccgacgggc
ctgcggccgatcagcgacgcggagctgaacgcctacatcggctcgaccaagggtccgctg
ggtcatgccacggacgcggtcggggactgggcgaaggacaactgggagtacgtcgcggcc
ggcgcgatgatcgtcgccggcgcggcgctgatgatcgcgccggtgccgggcgtggcccag
gccgcgggcatggcgctgatctcggcgggcatcgacaccgggatccagaaggccacgacc
ggtgaggtgaactggggccaggtcgcggtctcgggtgctgcgggggcgatcgggttcggt
gccggcggcctgcttgctcgtgggggcgccagcgcggtgaaggtcgccgtggccgagggc
gtcaccgagggtgtcgtctccggtgccggtgggtacctgacgggcccgggaccgcacacc
ccggaggggttgctgcgcaacaccgcgatgggtgcggggaccggggtgctcccggggccg
gcgatgggcgacgacgccgtccgagcgggcacgcgcagtctcgacgacgtaccgcccgtc
acccacccaccgcgcgccgacttcatcgccagcgcagacggtgtcgtcatccccacgagt
cgatcccgtctggagggtggcttcaacgatgcaggcttccccgctgcgccgacagatcgt
ccagggacgggatacacactccctgacggttccaaggtccgcgtcatggatccatctgga
caggctcccgcccgtgcgtccttcacgaacgcgaacaacgggccggtggacgctttcacc
ggcaagccgatccagccaccctctggcctgacaggaccagagcgaaaggcttacgtgagg
gagcgcagtcatgtcgaactggacccctag
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