Nocardioides aquaticus: ENKNEFLB_00543
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Entry
ENKNEFLB_00543 CDS
T07580
Symbol
sigF_1
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
naqu
Nocardioides aquaticus
Brite
KEGG Orthology (KO) [BR:
naqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
naqu03021
]
ENKNEFLB_00543 (sigF_1)
Transcription machinery [BR:
naqu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ENKNEFLB_00543 (sigF_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_37
MarR_2
KORA
HTH_24
DUF7343
GerE
HTH_3
HTH_IclR
HTH_1
Phage_antitermQ
HTH_50
HTH_31
HTH_15
Motif
Other DBs
NCBI-ProteinID:
QVT78170
LinkDB
All DBs
Position
complement(553405..553851)
Genome browser
AA seq
148 aa
AA seq
DB search
MEHPPPREVQRAHSRILRSSDQRDRYDADALERLAAEVEESVEVVREALVARDGFSLLSL
DKPTEAGGSTIDVADVGDHAAEAAEARTMLAPLVASMDERERQILAWRFVDEMSQRQIAE
RLGMTQIQVSRLLQKMLTHLRATLGDVG
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
gtggagcatccgcccccgcgcgaggtgcagcgggcccactcccggatcctgcgcagcagc
gaccagcgcgaccgctacgacgccgacgcgctcgagcggctggccgccgaggtcgaggag
tccgtcgaggtcgtccgtgaggcgctcgtcgcgcgggacggcttctcgctgctctccctg
gacaagcccaccgaggccggcggcagcacgatcgacgtcgcggacgtcggcgaccacgcg
gccgaggccgccgaggcgcggaccatgctggccccgctggtggcctcgatggacgagcgc
gagcgccagatcctggcctggcggttcgtcgacgagatgtcgcagcgccagatcgccgag
cgcctgggcatgacccagatccaggtgtcgcggctgctgcagaagatgctcacgcacctg
cgcgccacactcggcgacgtcggctga
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