Nocardioides aquaticus: ENKNEFLB_00688
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Entry
ENKNEFLB_00688 CDS
T07580
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
naqu
Nocardioides aquaticus
Brite
KEGG Orthology (KO) [BR:
naqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
naqu03032
]
ENKNEFLB_00688 (hupB)
03036 Chromosome and associated proteins [BR:
naqu03036
]
ENKNEFLB_00688 (hupB)
03400 DNA repair and recombination proteins [BR:
naqu03400
]
ENKNEFLB_00688 (hupB)
DNA replication proteins [BR:
naqu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ENKNEFLB_00688 (hupB)
Chromosome and associated proteins [BR:
naqu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ENKNEFLB_00688 (hupB)
DNA repair and recombination proteins [BR:
naqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ENKNEFLB_00688 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
HU-CCDC81_bac_1
DUF2267
HU-HIG
HU-CCDC81_bac_2
Lmo2446-like_N
HU-CCDC81_euk_1
PqqD
Motif
Other DBs
NCBI-ProteinID:
QVT78315
UniProt:
A0ABX8ED28
LinkDB
All DBs
Position
complement(697774..698052)
Genome browser
AA seq
92 aa
AA seq
DB search
MNKSQLVEDVATRADVDKATADRAVAAVLEAITEALVARDKVTIPGFGTFETRDRDARTG
RNPQTGEAIQVAATTAPAFKAGAELKRKVAGR
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagccagctcgtcgaggacgtcgccacccgcgccgacgtcgacaaggccacc
gccgaccgcgccgtcgccgccgtcctcgaggccatcaccgaggccctcgtcgcccgcgac
aaggtcaccatccccggcttcggcaccttcgagacccgcgaccgtgacgcccgcaccggc
cgcaacccccagaccggcgaggccatccaggtcgccgccacgacggcccccgccttcaag
gccggcgccgagctcaagcgcaaggtcgccggtcgctga
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