Nocardioides aquaticus: ENKNEFLB_01335
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Entry
ENKNEFLB_01335 CDS
T07580
Symbol
rhsB_2
Name
(GenBank) putative deoxyribonuclease RhsB
Organism
naqu
Nocardioides aquaticus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
Motif
Other DBs
NCBI-ProteinID:
QVT78955
LinkDB
All DBs
Position
complement(1366654..1372023)
Genome browser
AA seq
1789 aa
AA seq
DB search
MVDTSGWGGLPDVEMDDGAATGLAAACEDAARLLRDQATTRRTLTTTALQDFEGRFSRVF
EQNQGTADGDGEEIAVALDDVALLVRHIIAVVPEENARRKAAREWKERRDKDKSEITFGD
LGGDEAPPEGPQSPPAPKTLSASATPRENPPPGAGGDSAGTSSARPAALRGFVTGVESAL
SALDGRPGRLEGLNADFTSGFDWGTGEPAGVDGAAVYAALRSFNQLNRQDKLWVNTVADA
FESAGSETSGGMMTLSNAAIAASLQAAGVSVSRLDIAPTSPRLYGINPTTGYSDDPVNAA
TGNFVEPETDLAFSGGCGTLALTRMYNSFHHHPGAFGPGWSSWTETRLHLDDEAAHLTLP
DGRVVVFPRLGEGWDRATGGSMWLARDAAADELRATGNDGGTWRFSRTGAPLSHDRGEGT
MVAFVHEDGRLARLEHERGRHVVLTWDGDRVVAAEASDGRRTTYAYEEGRLVAATGARGT
RTYRWNEAGLVEAVIDADGVVEVENAYDDRARVTAQRSPHGRTSRYSYLPGHVTQVADPD
GTRADTWVHDSRGRLVGLVDSEGHRQSTSYDQHGNAVLLTARDGSVTVREFDERGRAVRE
VRPSGADLQFAYDDLDRVVRVVADDHAETCYSYEGTSRHPSVMVDPEGGETRLAWDAGLL
TRLADPTGVALSFGYDEHGDLVWTANSAGDTARLERDGSGRVVAAITPRGHRTTYAYGPT
GLCRRRDPDGATWHYEHTAGGRLSAVVDPTGARSSIEHGADGEERRRIDPLGHAVEQRLD
DLGNLASVELPDGSTWRFTHDTLSRLTSTTTPDGRTWTQTYDVLGSQVGSVDPLGNWTAV
RSDEAQGTVVTTDPFGSVTQRFDTLGRPTSAEQLDGSVALATYDRCGRAVEFLDAEGGLT
RVERDPAGRPVAVTDPTGRVTRYEYDACGRRSAVVDPAGARTTIEYNADSLPVRCTFPTG
EVGWTDYDECNRVVATATPGVGGSRLRYDAAGRVVEVRDSVSGLRRFTYDAAGQLVAATN
GNGGVTRYDYDARGRAVRLTDALGHVTRREFDLMGRCVAETDPLGRTTRAGYDAVGRQVW
QEDPSGRRIEWTYDAAHRVVAVEVDGRPVSSQRWDARARSVEVTDHTRPDGRVVRRATTW
NRRGQVVQETRDGATLSWQYDAAGRRTAMTLPDGSTVGYDHDAAGRVAAVDHPLLGRATF
ERDAAGRVVAAAAGDLLQSWEYADGFVVAHTATDAAGAVRTVVDRAEDGRIRSVGNDEAT
TTFDYDDACQLVASHVGEQRVRWRYDLAGRIVAESRDEGSRELAYDEAGQLLTVVGPEGT
TRHAYDAVGRRVRTELPDGRTRDLEWSPTGWLASIVDEAGGEAVRTSLHVDASGLLASVD
DVRVYWDGADPYAPSLVQVGATPVVAAGGLTGIGDRWAAPGWRTSRSHGADVWAVATQGT
GPVPPGMPDGVGISPGGELTIGGLEWLGARVYDAASRGFLSVDPLDPVAGAGWSGNPYSY
AGNDPLHALDPTGLKPVSEADLQAANKPWYEEAWDFVEENKDWIIGGVLVAGGVLLMATG
VGGPLGAMALSAGADVLIQKATKGEVNYAQAAVSGLAGGAGFVASKGLTVGGRLGLSSKV
LVNADKVKNAQMSTKIAVRTGIGTAEGYSYQVAGGADPLSRQAIGGGIAGGLTGGIVQRG
DSVAEATKKEVSQRILDTAVGRGRVMTGLIKADAAMTSTLQAGAIKLGHTVPGQASGELL
RQVTDDKPGVDYGKIGGKALGGGLAKPLPTGFSGPAGSGVGAGFDAAVS
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
gtggttgacacgagcggctggggcgggctgcccgacgtcgagatggacgacggcgccgcc
accgggctggccgccgcgtgcgaggacgccgcacgtctcctgcgcgaccaggccaccacc
cgccggacgctgacgaccaccgcactgcaggacttcgagggccggttctcgcgggtcttc
gagcagaaccagggcaccgccgacggcgacggcgaggagatcgcggtcgcgctggacgac
gtcgccctcctggtccgccacatcatcgcggtcgtgccggaggagaacgcgcgccgcaag
gcggcccgcgagtggaaggagcggcgcgacaaggacaagagcgagatcaccttcggcgac
ctcggaggcgacgaggccccacccgagggcccgcagtcgccgcccgccccgaagacgctg
tcggcctcggcgacgccccgtgagaaccccccgccgggggccggcggcgacagcgccggc
acctcctccgcccgtcccgccgcgctgcggggcttcgtgaccggcgtcgagagcgccctc
agtgcgttggacggcaggccgggccggctcgagggcctgaacgccgacttcaccagcggg
ttcgactggggcaccggggagcccgccggggtcgacggggccgcggtctacgcggcgctg
cgcagcttcaaccagctcaaccgccaggacaagctctgggtgaacaccgtcgccgacgcc
ttcgagagcgccggcagcgagacgtccggcgggatgatgaccctgtccaacgccgcgatc
gccgcctccctgcaggccgcgggggtgagcgtctcgcgcctcgacatcgcaccgacctcg
ccccgcctctacgggatcaacccgaccaccggctactcggacgacccggtgaacgccgcg
accggcaacttcgtggagcccgagaccgacctggccttctcgggtggctgcggcaccctg
gcgctgacccgcatgtacaactccttccaccaccaccccggcgccttcggccccggctgg
tcgagctggaccgagacccggctgcacctcgacgacgaggccgcccacctcacgctcccc
gacggacgggtcgtcgtcttcccgcgcctcggcgagggctgggaccgggccaccggcgga
tcgatgtggctcgcgcgcgacgccgccgccgacgagctgcgcgccaccggcaacgacggc
ggcacgtggcgcttcagccgcaccggcgccccgctctcgcacgaccgcggcgagggcacg
atggtggccttcgtccacgaggacggccgcctggcgcgtctcgagcacgagcgtggtcgc
cacgtcgtcctcacctgggacggtgaccgcgtcgtcgccgccgaggcctccgacggtcgc
cggacgacctacgcctacgaggagggccgcctggtcgctgcgaccggggcccgggggacg
cgtacctaccggtggaacgaggccgggctcgtcgaggcggtcatcgacgccgacggcgtg
gtcgaggtcgagaacgcctacgacgaccgggcccgcgtcaccgcccagcgctcgccgcac
gggcggaccagccgctactcctacctgcccggccacgtgacgcaggtcgccgaccccgac
gggacccgggccgatacctgggtccacgacagccgtgggcgcctggtcggcctggtcgac
tcggagggccaccggcagtcgacgagctacgaccagcacggcaacgcggtgctgctcacc
gcgcgggacggctcggtgaccgtccgcgagttcgacgagcggggccgcgcggtgcgggag
gtacgcccctcgggcgccgacctgcagttcgcgtacgacgacctcgaccgggtggtccgg
gtggtcgccgacgaccacgcggagacgtgctactcctacgagggaacctcgcgtcacccg
tcggtgatggtcgaccccgagggcggcgagacgcggctcgcgtgggacgcgggcctgctc
accaggctggcggacccgaccggcgtcgcgctctccttcggctacgacgagcacggggac
ctggtctggacggcgaactcggcgggcgacaccgcgcgcctcgagcgcgacggctccggc
cgcgtcgtcgccgccatcacccctcgtggacaccgcaccacctacgcctacggcccgacc
gggttgtgccggcggcgcgaccccgacggggcgacctggcactacgagcacaccgccggc
ggacgcctgagtgccgtcgtcgaccccaccggagcccgcagctcgatcgagcacggcgcc
gacggcgaggagcggcgacggatcgacccgctgggtcacgccgtcgagcagcggctcgac
gacctcggcaacctcgcctcggtcgagctgcccgacggcagcacctggcgcttcacgcac
gacaccctctcgcggctcacctccaccacgacgccggacgggcgcacgtggacgcagacg
tacgacgtcctcggcagccaggtcgggtcggtggaccccctgggcaactggactgccgtg
cggtccgacgaggcccagggcaccgtcgtcaccaccgacccgttcggcagcgtcacccag
cgcttcgacacgctcggccggccgacgtccgccgagcagctcgacggctccgtcgcgctg
gccacctacgaccgctgtggccgcgccgtcgagttcctcgacgccgagggcgggctgacc
cgggtcgagcgtgacccggccggccggccggtcgccgtgaccgacccgacgggcagggtc
acccgctacgagtacgacgcctgcgggcggcgcagcgccgtcgtcgacccggcgggtgcc
cgcaccaccatcgagtacaacgccgacagcctgccggtgcggtgcaccttccccaccggc
gaggtcgggtggaccgactacgacgagtgcaaccgggtggtcgcgaccgccacccccggc
gtcggcggttcccgcctgcgctacgacgccgcgggacgggtcgtcgaggtccgcgacagc
gtgtccgggctccgccgcttcacctacgacgccgccggacagctggtcgccgccacgaac
ggcaacggtggcgtcacgcgctacgactacgacgcccgtgggcgcgccgtgcgcctcacc
gacgcgctcggtcacgtcacccgccgcgagttcgacctcatgggccgctgcgtcgccgag
acggaccccctgggccgcacgacccgggccgggtacgacgccgtcgggcgccaggtgtgg
caggaggacccgtcgggccgtcgcatcgagtggacctacgacgccgcccaccgcgtcgtc
gccgtcgaggtggacgggcgtcccgtcagctcccagcgctgggacgcgcgggccaggtcc
gtcgaggtgaccgaccacacccgcccggacggccgggtcgtccgccgcgcgaccacgtgg
aaccggcgcgggcaggtcgtgcaggagacccgcgacggggccaccctgtcgtggcagtac
gacgccgccggccgccgtaccgcgatgacgctgcccgacggcagcaccgtcgggtacgac
cacgacgccgcgggccgcgtcgccgcggtggaccaccccctgctgggccgggcgacgttc
gagcgcgacgcggcggggcgcgtggtcgccgccgcggccggcgacctgctccagtcgtgg
gagtacgccgacggcttcgtggtcgcgcacaccgcgacggacgccgcgggcgcggtccgc
accgtggtcgaccgcgccgaggacggacgcatccgcagcgtcgggaacgacgaggcgacg
accacgttcgactacgacgacgcctgccagctggtcgcctcgcacgtcggtgagcagcgc
gtccgctggcgctacgacctggccggccgcatcgtcgcggagtcgcgcgacgaggggagc
cgcgagctcgcctacgacgaggccggtcagctgctgaccgtcgtgggacccgagggcacc
acgcgccacgcctacgacgcggtcggacggcgggtgcgcacggagctccccgacgggcgg
acccgcgacctggagtggtcgcccacgggctggctcgcctccatcgtcgacgaggccggc
ggtgaggccgtccgcaccagcctgcacgtggacgcctcgggcctgctggcctccgtcgac
gacgtccgggtgtactgggacggcgcggacccgtacgcgccgtcgctggtccaggtcggc
gccacgccggtggtggccgcgggcggcctcaccgggatcggtgaccggtgggcggctccc
ggctggcggacgtcgcgctcccacggcgccgacgtgtgggcggtggccacccagggcacc
ggcccggtgcccccgggcatgccggacggtgtcgggatcagccccggcggcgagctcacc
atcgggggcctcgagtggctgggggcgcgggtctacgacgccgccagccgcggcttcctc
tccgtcgacccgctcgacccggtggcgggcgcgggatggtcaggcaacccctactcctac
gccggcaacgacccgctgcacgccctcgacccgaccggcctcaagccggtctccgaggcc
gacctccaggcggcgaacaagccctggtacgaggaggcgtgggacttcgtcgaggagaac
aaggactggatcatcggcggcgtcctcgtcgcgggaggcgtcctcctgatggccaccggc
gtcggtgggcccctgggcgcgatggcgctctccgccggtgcggacgtcctcatccagaag
gccaccaagggtgaggtgaactacgcccaggctgcggtgtccggcctggcaggtggcgcc
ggtttcgtggccagcaagggcctcaccgtcggtggtcgcctcggtctgtcgagcaaggtc
ctcgtcaacgcggacaaggtcaagaacgcccagatgtcgacgaagatcgcggtccgcacc
ggcatcggcacggccgagggctactcctaccaggtcgccggaggtgccgatcccctgtcg
aggcaggccatcgggggcgggatcgccggtggcctcaccggcggcatcgtccagcgcggg
gactccgtggccgaggcgaccaagaaggaggtgtcgcagaggatcctcgacaccgccgtg
ggcaggggccgggtgatgaccggtctcatcaaggccgacgccgcgatgacgagcaccctc
caggccggggcgatcaagctcggccacacggtccccggccaggcctcgggggagctcctc
cggcaggtgacggatgacaagcccggcgtcgactacgggaagatcggcggcaaggctctc
ggcggtgggctggcgaagccactgcccaccggcttctccggacccgccggcagcggggtc
ggagcgggcttcgacgccgccgtgagctga
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