Nocardioides aquaticus: ENKNEFLB_01339
Help
Entry
ENKNEFLB_01339 CDS
T07580
Symbol
alkA
Name
(GenBank) putative bifunctional transcriptional activator/DNA repair enzyme AlkA
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
naqu
Nocardioides aquaticus
Pathway
naqu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
naqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ENKNEFLB_01339 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
naqu03000
]
ENKNEFLB_01339 (alkA)
03400 DNA repair and recombination proteins [BR:
naqu03400
]
ENKNEFLB_01339 (alkA)
Enzymes [BR:
naqu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ENKNEFLB_01339 (alkA)
Transcription factors [BR:
naqu03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ENKNEFLB_01339 (alkA)
DNA repair and recombination proteins [BR:
naqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ENKNEFLB_01339 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QVT78959
LinkDB
All DBs
Position
1375726..1377309
Genome browser
AA seq
527 aa
AA seq
DB search
MTTTDEPPAAPDGLDPQACYRVVESRDPRFDGVFWTAVRTTGIYCRPSCPARTPAARNVT
FHASAAAAQAAGYRACRRCRPDASPGSPDWDVAATTAGRAMRLIADGVVDREGVPGLAGR
LGYTPRHLTRLLGDELGAGPLALARARRAQTARTLVERTDLPLTDVAHAAGFASVRQFNQ
TVLDVYAATPGELRSRRGRTVPGGGRGAVREDLDPPGALTLRLPVRTPFAGRELLGFLAY
HVVPGVETAGPGWYARTLDLPHAPGTVRVLLDDPDPGPGTATVEAVFGLGDLRDLPAAVE
RVRRMLDADADPAVVDRHLGEDDVLAPLVAARPGLRVPGQVDGDETAVRTVVGQQVSVVG
ARTVTARMVQAHGRAVTTGVPGLTHLFPRADVLAAVDPETLPMPRARGRALVGLCAALAE
GRVRLDRGVARADTRAAMLALKGIGPWTADYVAMRALGDPDVFLPTDIGVRNALSGLGQD
PATLLPQVTGDGGRWAPWRSTALMHLWATVIPALPDPDRDPDRPEET
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccacggacgagcctcccgcagcgcccgacgggctggacccgcaggcctgctac
cgggtggtggagtcgcgcgacccccggttcgacggggtgttctggaccgccgtgcgcacg
accgggatctactgccgcccgtcctgcccggcgcggacgccggcggcacgcaacgtgacc
ttccacgcgagcgcggcggcggcgcaggcggcgggctaccgcgcctgccggcgctgccgt
cccgacgcctctcctgggagcccggactgggacgtcgccgcgaccacggccggtcgggcc
atgcggctgatcgccgacggggtggtcgaccgggagggcgtgcccgggctggccggacgg
ctcggctacaccccccgccacctgacccgcctgctcggcgacgagctcggggccgggccc
ctggcgctggcccgggcgcggcgcgcgcagaccgcgcggaccctggtcgagcgcaccgac
ctcccgctgaccgacgtcgcgcacgccgccggcttcgccagcgtgcggcagttcaaccag
accgtgctggacgtctacgcagcgacccccggcgagctgcgctcacgccgcggacgcacg
gttccgggtggcgggcgcggggcggtgcgtgaggacctggacccgcccggtgcgctgacg
ctgaggctgccggtgcgcacccccttcgccggccgcgagctgctgggcttcctggcctac
cacgtggtcccgggggtcgagaccgccggaccgggctggtacgcccgcaccctcgacctg
ccccacgcccccgggacggtccgtgtcctgctcgacgacccggaccccggcccgggcacg
gcgaccgtcgaggccgtcttcggtctcggcgacctgcgcgacctgcccgccgcggtggaa
cgcgtccgccggatgctcgacgccgacgccgaccccgcggtggtcgaccgccacctcggc
gaggacgacgtgctcgcgcccctggtcgcggcccgcccggggttgcgcgtgcccggacag
gtcgacggtgacgagaccgcggtccgcaccgtggtcggccagcaggtcagcgtggtcggg
gcgcgcaccgtgaccgcacggatggtgcaggcgcacgggcgcgcggtgaccacgggcgtt
ccgggcctgacgcacctgttcccgcgggccgacgtgctggcggcggtcgacccggagacg
ctgccgatgccgcgcgcccggggccgggcgctggtcgggctgtgcgccgcgctcgccgag
gggcgggtccggctcgaccggggcgtcgcccgcgcggacacccgggcggcgatgctggcg
ctgaagggcatcgggccctggacggccgactacgtcgcgatgcgcgccctcggcgacccg
gacgtcttcctgccgaccgacatcggcgtgcgcaacgccctgagcgggctcgggcaggac
cccgcgaccctcctgccgcaggtcaccggtgacggcggccgctgggcgccgtggcgctcg
accgcgctgatgcacctgtgggccaccgtcatcccggccctgcccgaccccgaccgcgac
cccgaccgacccgaggagacctga
DBGET
integrated database retrieval system
